NNNAATCTATAAATTGTGGGCGCTAATAAGAACACTAATTTCTACAAAAG
CGCGGAAATCCCANCTTTTCTCCATATGAAGATAAATGGGAAAAATTCTC
AATACATAAGCCAAATCCCAGAACACATCCAAACAATCCTCCGGCCTGGA
AAAGGAAGGTTCCTCCCAGGGAAGGAAGGAAGGGTCAATATGTGGAAATC
CATCAACTTAATCCACTATATAAACAAACTCAAAGGAAAAAATATATGAT
TATCTCATTAGATGCTGAAAAACATTTGAAAAAATTCAACACCCATTCAT
GATAAAAGTCTTGGAAAGATCATGTANTTAGGCCCATTCCTCAACATAAT
AAAAGCAATATTCAACAAACCAGTAGCCAACATCAAACTAAATAAAGTAG
TGATCACACTAAAATCAGGAACTAGACAAGGCTGCCCATTCTTTCCCTTC
CTATTCAGTATAGTACTTGAACTCTTACCCAGAGCAATGAAACAACAAAA
GGAGATCCCAGGGATACAAATTGTAAAGGAAGAAACCAAAAAACCCCTAT
TTGCCAATAAAATGAAAGTAAACATTAGTTGACCCCCCAAAAGCCAACCC
GAAAACTCCTACCCTCGGAAAAAAATTTCCGTGCGGAAGCGGGTAATAAA
ACCCACCCCCCATTTAATTCTCACCCTTTTTGTTTCTTAAGGGATCAACC
GCGTTCGTCTAAAAAATAAGGAAAAAATGCCCCCCTCCCAAAATTCCCAC
AAAAAAAAAAAAAATTTGTGGGGGGGGAAA

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCTCTAAAACATAAACTTTTTTTTGTCCTACATATCTAAG
AAACCCAAGTATGTTATTAGTCAGATCCATATAGTTTCAAAATGGGAACA
TTTCAAATTGAATAGACAAAAAGCATTTTGATGAATAATGGGCGTATATG
ATTTTGGTTTCCTTCAGCATAAAACCAACCCTAGAAAAGCAGTCCCAGCA
TGCATTGTGGCAATTACTCTAATTAACTCCTAGGACATCAGTGCCTTCTT
GGCTTTGGGTCAAGTTTGAAATTAAGAAAGAGAACAGGTTTTTCAGTAAT
TATGCAGGAAAGCAGGCATTGTCATGTGAGGTTTGGATTTGTTTGGAACT
GAGCTATTTAGAGATGAATTGTCTATGTTACTTTTCTACACGTTACCTTC
ACTGTCTTGGAATGTTCTCAGACTCTCGAAGGCCATCAATATTAATTGAT
GAAGTGACTGACAAGATACTTCAAGTCTGTTAAAAAATGTATTTTGTTTG
GAGATTTTAGACAGGCTCTGAACAGGTTGACACACATTCTCAATACAAAA
AAAAAATCACTAAGGGTACAACCAAATTCCACACCGTTTCTTAAACTTAT
TAGCTTTTTATTACTAGAACAACAACCTGAGGCAACTTGATTATAAGGAA
AAAGTGGATTTTAGCTCCTGGTGGCCTGAGATTTTGCCCCGTGCTGTTGG
CCCCATTGTTTGGGAAAACGGGGN

Query= MSMg01no419_m22.g1 MSMg01no419_m22.g1 CHROMAT_FILE:
MSMg01no419_m22.g1 PHD_FILE: MSMg01no419_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:27 2005
         (490 letters)



>mm_chr2_56853492_56854383
          Length = 892

 Score =  917 bits (474), Expect = 0.0
 Identities = 487/492 (98%), Gaps = 2/492 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctctaaaacataaac--ttttttttgtcctacatatctaagaaacccaagtatgttatta 58
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctctaaaacataaacttttttttttgtcctacatatctaagaaacccaagtatgttatta 633

                                                                       
Query: 59  gtcagatccatatagtttcaaaatgggaacatttcaaattgaatagacaaaaagcatttt 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtcagatccatatagtttcaaaatgggaacatttcaaattgaatagacaaaaagcatttt 573

                                                                       
Query: 119 gatgaataatgggcgtatatgattttggtttccttcagcataaaaccaaccctagaaaag 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gatgaataatgggcgtatatgattttggtttccttcagcataaaaccaaccctagaaaag 513

                                                                       
Query: 179 cagtcccagcatgcattgtggcaattactctaattaactcctaggacatcagtgccttct 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cagtcccagcatgcattgtggcaattactctaattaactcctaggacatcagtgccttct 453

                                                                       
Query: 239 tggctttgggtcaagtttgaaattaagaaagagaacaggtttttcagtaattatgcagga 298
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 452 tggctttgggtcaagtttgaaattaagaaagtgaacaggtttttcagtaattatgcagga 393

                                                                       
Query: 299 aagcaggcattgtcatgtgaggtttggatttgtttggaactgagctatttagagatgaat 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aagcaggcattgtcatgtgaggtttggatttgtttggaactgagctatttagagatgaat 333

                                                                       
Query: 359 tgtctatgttacttttctacacgttaccttcactgtcttggaatgttctcagactctcga 418
           |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 332 tgtctatgttacttttctacaccttaccttcactgtcttggaatattctcagactctcga 273

                                                                       
Query: 419 aggccatcaatattaattgatgaagtgactgacaagatacttcaagtctgttaaaaaatg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aggccatcaatattaattgatgaagtgactgacaagatacttcaagtctgttaaaaaatg 213

                       
Query: 479 tattttgtttgg 490
           ||||||||||||
Sbjct: 212 tattttgtttgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 892
Length adjustment: 10
Effective length of query: 480
Effective length of database: 882
Effective search space:   423360
Effective search space used:   423360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)