Query= MSMg01no420_e03.b1 MSMg01no420_e03.b1 CHROMAT_FILE:
MSMg01no420_e03.b1 PHD_FILE: MSMg01no420_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:02 2005
(314 letters)
>mm_chr2_143071535_143072248
Length = 714
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Minus
Query: 1 ggcaccatctgttagaacttggcaaagtgcactaatatatgattcattagcttgtgtata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggcaccatctgttagaacttggcaaagtgcactaatatatgattcattagcttgtgtata 455
Query: 61 ttctaatatgatccaagacttgaaaataatttttcagaccttcatagaacttatgactca 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 454 ttctaatatgatccaagacttgaaaataatttttcagactttcatagaacttatgactca 395
Query: 121 ttttggaatgttttcccttatttccattttattatttggctttagaatcaaaattagaca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 394 ttttggaatgttttcccttatttccattttattatttggctttagaatcaaaattagaaa 335
Query: 181 ctgaagtgaataatttatgggccacactgtctcttgtttcctttttgcataatactaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgaagtgaataatttatgggccacactgtctcttgtttcctttttgcataatactaagc 275
Query: 241 atttgcaattaaatgaaggcacattaaaaattaaaaaataaagtgattcactaccagtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atttgcaattaaatgaaggcacattaaaaattaaaaaataaagtgattcactaccagtta 215
Query: 301 gcttggaaaggcag 314
||||||||||||||
Sbjct: 214 gcttggaaaggcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no420_e03.g1 MSMg01no420_e03.g1 CHROMAT_FILE:
MSMg01no420_e03.g1 PHD_FILE: MSMg01no420_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:02 2005
(244 letters)
>mm_chr2_142910157_142910800
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 ccccccaccccaccccagtgctaataagctcttatccccaggactgacctcatccaagag 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cccccc-ccccaccccagtgctaataagctcttatccccaggactgacctcatccaagag 260
Query: 61 tggggaagtccttgtttggttataccttctggggaaccatctatatgaaaatagggttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggaagtccttgtttggttataccttctggggaaccatctatatgaaaatagggttca 320
Query: 121 ccatgcagggcatggtgatcctttctgccctctgatctattgtgtccctgggaactgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgcagggcatggtgatcctttctgccctctgatctattgtgtccctgggaactgatt 380
Query: 181 ataggacagacctcagatccctagaaacctgaattagaatcagcatgctctctggcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataggacagacctcagatccctagaaacctgaattagaatcagcatgctctctggcttct 440
Query: 241 gggt 244
||||
Sbjct: 441 gggt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
