Query= MSMg01no421_a15.b1 MSMg01no421_a15.b1 CHROMAT_FILE:
MSMg01no421_a15.b1 PHD_FILE: MSMg01no421_a15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:03 2005
(646 letters)
>mm_chr2_52700395_52701440
Length = 1046
Score = 1131 bits (585), Expect = 0.0
Identities = 627/641 (97%)
Strand = Plus / Minus
Query: 6 gaattcctttcctacttacactgttcctactgactttaactaaacctgtctccttgatcc 65
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gaattcctttcctactgagactgttcctactgactttaactaaacctgtctccttgatcc 787
Query: 66 agctgtctacctttcttgtttacctgaccgtaataatctcgcctccctcttcagctgtgt 125
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 786 agctgtctacctttcttgtttacctgactgtaataatctcgcctccctcttcagctgcat 727
Query: 126 gccacaattccacctctctgttcacctctataaaatagccatgctgagcttcccttgcgc 185
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gccacaattctgcctctctgttcacctctataaaatagccatgctgagcttcccttgcgc 667
Query: 186 tgtggtttctccatctgagagccttagtccactcaagcccagcttttctctgtgcatgtg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgtggtttctccatctgagagccttagtccactcaagcccagcttttctctgtgcatgtg 607
Query: 246 tctgtctgtctgtctgccatttcttcttcttctgtattttcccagtcaggtcagtctctg 305
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 606 tctgtctgtctgtctgccatttcttcttcttctgtaagctcccagtcaggtcggtctctg 547
Query: 306 aagccatgcatggactcagcacgaaggcttcccaacaaggctattatggtccttgttgga 365
||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 546 aagccatgcattgactcagcaggaaggcttcccaacaaggctactatggtccttgttgga 487
Query: 366 tttaatgaatatacaataagcgtctcacagtgtgtcggcctgcaggtaccatggtttccc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tttaatgaatatacaataagcgtctcacagtgtgtcggcctgcaggtaccatggtttccc 427
Query: 426 gttctcagcactcaaggaccaccagaggacccgaacctgtcctttctaccacctactcta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gttctcagcactcaaggaccaccagaggacccgaacctgtcctttctaccacctactcta 367
Query: 486 acctaacagccacagatgagaatcgcctgtaagaggaattaattaaaaggttttgttctt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acctaacagccacagatgagaatcgcctgtaagaggaattaattaaaaggttttgttctt 307
Query: 546 aatagcactgggaggagcaccctgttttttatctctgttggaatggaatctttgaaagga 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aatagcactgggaggagcaccctgttttttatctctgttggaatggaatctttgaaagga 247
Query: 606 aatgtaaataaataagtcagatactatcggggctgcttgcc 646
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 aatgtaaataaataagtcagatactatcggggctgcttgcc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_a15.g1 MSMg01no421_a15.g1 CHROMAT_FILE:
MSMg01no421_a15.g1 PHD_FILE: MSMg01no421_a15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:03 2005
(605 letters)
>mm_chr2_52537248_52538252
Length = 1005
Score = 779 bits (403), Expect = 0.0
Identities = 447/463 (96%), Gaps = 4/463 (0%)
Strand = Plus / Plus
Query: 1 cacacaatgcgttttgatcatgttcaaccctcctcggctccttccagatcgcctatttcc 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 cacacaatgcgttttcatcatgttcaaccctcctcggctccttccagatcgcctgtttcc 260
Query: 61 ctttcctgactcacccgacttttcctctttctttttctttttaaaccataagagttcaat 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ctttcctgactcacccgacttttcctctttctttttctttttaaaccacaagagttcaat 320
Query: 121 ttgtgctcttaggtgtggggtttgaaactgattgacctactaggaacaacacccttaaac 180
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 321 ttgtgctcttaggtgtggggtttgaaactgattgacctagtaggagcaacacccttaaac 380
Query: 181 gaaactagctctctctaccaacaggtgtcaatcaccaaccacccctcagctaggggtggg 240
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 381 gaaactagctctctctaccaacaggtgtcaatcgccaaccgcccctcagctaggggtggg 440
Query: 241 attcatgtctat-ccccccactctaggctgggactttgattcgattgagctcacatgggt 299
|||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 441 attcatgtctattccccccactctaggctgggactttgattagcttgagctcacatgggt 500
Query: 300 cttttgcatgctgtcacactgccctgctgtatccagaaaacactagggtgctg---ttgt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 cttttgcatgctgtcacactgccctgctgtatccagaaaacactagggtgctgctgttgt 560
Query: 357 tgttgtttcaagtcacacactgactctggctcttactatctttctgcccatactctcaca 416
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 561 tgttgtttcaagtcacacactgactctggctcttactatctttctgcccacactttcaca 620
Query: 417 atgatcccgagccttggttggaagttgtatgaaagacatccct 459
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 atgatcctgagccttggttggaagttgtatgaaagacatccct 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
