Query= MSMg01no421_e12.b1 MSMg01no421_e12.b1 CHROMAT_FILE:
MSMg01no421_e12.b1 PHD_FILE: MSMg01no421_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:24 2005
(245 letters)
>mm_chr2_43626632_43627277
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 1 ctatattctccttgtgtagcagatgagctatgtggtcacccccacccacaaaagcaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctatattctccttgtgtagcagatgagctatgtggtcacccccacccacaaaagcaaggt 387
Query: 61 cccttccacccccaaatttagcaagcctctgtgcagtcagaccctgttcctgtctctgc- 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cccttccacccccaaatttagcaagcctctgtgcagtcagaccctgttcctgtctctgct 327
Query: 120 tgtgcgggacagactgactctccaggtttgttaagggttcatggctactccacagacaag 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 326 tgtgcgggacagactgactctccaggtttgttaagggttcatgactactccacagacaag 267
Query: 180 cattgttcttgagtgaaattcatttcaatcccctggaaagatcttatgttgatctgtggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cattgttcttgagtgaaattcatttcaatcccctggaaagatcttatgttgatctgtggt 207
Query: 240 agaaca 245
||||||
Sbjct: 206 agaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_e12.g1 MSMg01no421_e12.g1 CHROMAT_FILE:
MSMg01no421_e12.g1 PHD_FILE: MSMg01no421_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:24 2005
(210 letters)
>mm_chr2_43475523_43476132
Length = 610
Score = 352 bits (182), Expect = e-102
Identities = 200/206 (97%)
Strand = Plus / Plus
Query: 1 catttgtaattcaacattgggcttttcagaggcctctatttctttagacacttgctttaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 catttgtaattcaacattgggcttttcagaggcctctatttctttagccacttgctttaa 260
Query: 61 gccatggtcagccatggtaaatgacattttgagggtggacagggagtttttctccatgtt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccatggtcagccatggtcaatgacattttgagggtggacagggagtttttctccatgtt 320
Query: 121 gctttgagctgtttgcagacagagccccaaaggccacacaaagtatcgcttctctgaacc 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 321 gctttgagctgtttgcagacagagccccgaaggccacacaaagtatcgcttctctgtacc 380
Query: 181 ctggggggggggggtgaattgtttaa 206
||||| ||||||| ||||||||||||
Sbjct: 381 ctgggcgggggggatgaattgtttaa 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
