Query= MSMg01no421_i12.b1 MSMg01no421_i12.b1 CHROMAT_FILE:
MSMg01no421_i12.b1 PHD_FILE: MSMg01no421_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:44 2005
(242 letters)
>mm_chr2_4235524_4236165
Length = 642
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%)
Strand = Plus / Plus
Query: 1 caaagccattgggcctcaccccattgtataattgagggacttggagtctcagcataccct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagccattgtgcctcaccccattgtataattgagggacttggagtctcagcataccct 260
Query: 61 gaaatgaaggggttctcaagggaagcacagagattacgctgtaggtagggtccccattgg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gaaatgaaggggttctcaagggaagcacagagattacgctgtaggtggggtccccattgg 320
Query: 121 aacagtggcacattgtcacaatgcgtctctcagcatattatgcacaaaaatcacttttct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aacagtggcacattgtcacaatgcgtctctcagcatattatgcacaaaaatcacttccct 380
Query: 181 gggcaaagcttgctgcctcggagtgtgagctagggccaagaaccaatagaaagctgcgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcaaagcttgctgcctcggagtgtgagctagggccaagaaccaatagaaagctgcgtt 440
Query: 241 ta 242
||
Sbjct: 441 ta 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_i12.g1 MSMg01no421_i12.g1 CHROMAT_FILE:
MSMg01no421_i12.g1 PHD_FILE: MSMg01no421_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:44 2005
(175 letters)
>mm_chr2_4340899_4341474
Length = 576
Score = 310 bits (160), Expect = 4e-89
Identities = 172/176 (97%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 1 cctgcctgacattgcaggatggttagaaagggcatgcttcgctttccaacacaacaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 cctgcctgacattgcaggatggttagaaagggcatgcttcgctttccaacaaaacaaaac 317
Query: 61 aaatcacaagcaaggctggccaggctggtagcacagacatggtgaagggacacctcgggt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaatcacaagcaaggcgggccaggctggtagcacagacatggtgaagggacacctcgggt 257
Query: 121 atggaaggtgacatgacatgctgaagaaaggtt-gtcagtgggcacctggtttggg 175
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 256 atggaaggtgacatgtcatgctgaagaaaggtttgtcagtgggcacctggtttggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 576
Length adjustment: 8
Effective length of query: 167
Effective length of database: 568
Effective search space: 94856
Effective search space used: 94856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
