Query= MSMg01no422_f17.b1 MSMg01no422_f17.b1 CHROMAT_FILE:
MSMg01no422_f17.b1 PHD_FILE: MSMg01no422_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:47 2005
(515 letters)
>mm_chr2_145425046_145425960
Length = 915
Score = 973 bits (503), Expect = 0.0
Identities = 509/511 (99%)
Strand = Plus / Plus
Query: 1 tcctaagttctaaattgaagtctctgctctttgggccgtctctctctgcaatcagagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctaagttctaaattgaagtctctgctctttgggccgtctctctctgcaatcagagact 260
Query: 61 ctaatcattgggtttttataaaatctgatttataaaattgcatgcttcacaataaaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaatcattgggtttttataaaatctgatttataaaattgcatgcttcacaataaaatag 320
Query: 121 cttcagggtgcaagcacaaaatttaaaacattcaattaaaaatataaaacagagccacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcagggtgcaagcacaaaatttaaaacattcaattaaaaatataaaacagagccacag 380
Query: 181 ccataaaaagaaaaaaaaaaaaccacacagcatacattagactcttcagctgcctcctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccataaaaagaaaaaaaaaaaaccacacagcatacattagactcttcagctgcctcctgg 440
Query: 241 gatctagatagctttaaaataactttaaacattttgtctgaaaatccaaaagccattttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatctagatagctttaaaataactttaaacattttgtctgaaaatccaaaagccattttg 500
Query: 301 gacttgccagataggtagaaaccttccaggctgtgtgacacatgtaactttggcaaaaac 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 gacttgccagataggtagaaaccttccaggctatgtgacacatgtaactttggcaaaaac 560
Query: 361 ttgcatctattcatcctggccacttctctgggatgaagtttgtggatgcggtgatctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgcatctattcatcctggccacttctctgggatgaagtttgtggatgcggtgatctggt 620
Query: 421 cttgtgggtaagagttaagcacttcccattcagcctgagaagtagctctcacccagcccc 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgtgggtaagagttaaacacttcccattcagcctgagaagtagctctcacccagcccc 680
Query: 481 tgagtagccttggaaatgtggctaaattact 511
|||||||||||||||||||||||||||||||
Sbjct: 681 tgagtagccttggaaatgtggctaaattact 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_f17.g1 MSMg01no422_f17.g1 CHROMAT_FILE:
MSMg01no422_f17.g1 PHD_FILE: MSMg01no422_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:47 2005
(525 letters)
>mm_chr2_145577626_145578551
Length = 926
Score = 768 bits (397), Expect = 0.0
Identities = 431/443 (97%), Gaps = 4/443 (0%)
Strand = Plus / Minus
Query: 1 tattcccttactaccccctaaatagcctgccattcctatttggctctgtacaattttctc 60
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 443 tattcccttactaccccataaatagcctgccattcctatttggttctgtacaattttctc 384
Query: 61 tgaagtgatggctaccgaacagaatgcaggtgtaggacaaaaatcacaggggcttggagc 120
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 383 tgaagtgatggctaccgaacagaacacaggtgtaggacaaaaatcacaggggcttggagc 324
Query: 121 aaaacaagactccggataactaaactgttgaccactggtagagaattgaaaacaatgtct 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaaacaagactccagataactaaactgttgaccactggtagagaattgaaaacaatgtct 264
Query: 181 gtacacttgaaataggaagaggactgatccagatgaggtc-ttttgttgtcgttgttttt 239
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 263 gtacacttgaaataggaagaggactgatccagatgaggtctttttgttgttgttgttttt 204
Query: 240 tggttttgtttttccgagacagggtt--tctgtgtagccctggctgtcctggaactcact 297
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 203 tggttttggttttccgagacagggtttctctgtgtaaccctggctgtcctggaactcact 144
Query: 298 cttgtagaccaggctagcctcaaactcagaaatccacctgcctctgcctcccaagtgctg 357
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 c-tgtagaccaggctagcctcaaactcagaaatccacctgcctctgcctcccaagtgctg 85
Query: 358 ggattaaaggcgtgcaccaccactaccaggccagatggggtctttttaagtcaactttac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ggattaaaggcgtgcaccaccactaccaggccagatggggtctttttaagtcaactttac 25
Query: 418 cctgaaggacaagggaaatacaa 440
|||||||||||||||||||||||
Sbjct: 24 cctgaaggacaagggaaatacaa 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space: 471740
Effective search space used: 471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
