XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAATT
TCGTGTAATTTCTTTTAGAAACAAGAGATTTCAGAGGAAGAAGAATATCA
TTTGTCAGATACTACTCAGGAACACCTCAATATTTCTGAATGCACTTATA
GTTCATATTATCTACCCTAATTATGGCAGACTTACAGTAGTTAGGAGACA
ATGTCACCCTAGAAAACACATATATTATTGTGAAGTTAGAGCAAACAATT
TGAGGGGAAGACTCTCTAGAAAGAATAGTACTAGTTAGTAGCCATGGCTG
TCTTGTTATCAAGAGAGAAGGCAAGAAAGCAGTAAATAATTATCAACAAT
TTACTCTTTCCTAGATATAAGCCCATACTATATCTCAATTGGTATTCCTG
AGAGAGCAAGCTGAAGGAGGTTTGGCATCTAAAAGCATTCATAAAGTATT
TTATTCTAGACAAATTTGATGAAATATAATGGAAAGAAAGATGAATTGAA
TTAAATTGATTAAATTGAATATTCCTCTTCTGAGCATTTGGTTCTTAAAG
ATTCTGATCCCATTCTTGTCAGATCACATGAATAGATGTGCTAGATACTT
ATGAAAAGGGTAAAGAAATATGGATGTTTGGGGTATGGCTGTGTGTTCTT
GAAAAACTTTCTTACTTCCCATCCTTTCCCCTTAAAACCAACCATTTGCT
GGCTTCTCCCCTTTCTTCTTTTTCTCGTCTACTTCGTTTTTGTTTGGCCA
TGTN

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGA
AAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACC
CTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGG
TGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATT
GTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGG
TTCCTCATATTATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCT
CCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCT
CCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAA
CCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTA
CACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCC
TAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAT
TCTCAAAGGAACTCACACAATATGTACTCACTGATTAGCGTATATTAACC
CCAAACCTAGGATACCCCAGAAAAAAGAAACAATTTCTCTAACCCTTGAA
ACTCTTGAAAAAGAAGACTGGAGTGTGTACACCATGCCCCCTCT

Query= MSMg01no423_f10.b1 MSMg01no423_f10.b1 CHROMAT_FILE:
MSMg01no423_f10.b1 PHD_FILE: MSMg01no423_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:00 2005
         (489 letters)



>mm_chr2_115276087_115276973
          Length = 887

 Score =  880 bits (455), Expect = 0.0
 Identities = 480/489 (98%), Gaps = 2/489 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtaatttcttttagaaacaagagatttcagaggaagaagaatatcatttgtcagatacta 60
           |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 687 gtaacttcttttagaaacaagagatttcagaggaagaagaatatcatttgccagatacta 628

                                                                       
Query: 61  ctcaggaacacctcaatatttctgaatgcacttatagttcatattatctaccctaattat 120
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctcaggaacacctcaatattcctgaatgcacttatagttcatattatctaccctaattat 568

                                                                       
Query: 121 ggcagacttacagtagttaggagacaatgtcaccctagaaaacacatatattattgtgaa 180
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 567 ggcagacttacagtagttaggagacaatgtcaccctagaaaacac--atattattgtgaa 510

                                                                       
Query: 181 gttagagcaaacaatttgaggggaagactctctagaaagaatagtactagttagtagcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttagagcaaacaatttgaggggaagactctctagaaagaatagtactagttagtagcca 450

                                                                       
Query: 241 tggctgtcttgttatcaagagagaaggcaagaaagcagtaaataattatcaacaatttac 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tggctgtcttgttagcaagagagaaggcaagaaagcagtaaataattatcaacaatttac 390

                                                                       
Query: 301 tctttcctagatataagcccatactatatctcaattggtattcctgagagagcaagctga 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 actttcctagatataagcccatactatatctcaattggtattcctgagagagcaagctga 330

                                                                       
Query: 361 aggaggtttggcatctaaaagcattcataaagtattttattctagacaaatttgatgaaa 420
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 329 aggaggtttggcatctaaaagcattcataaagtattttattttagacaaatttgatgaaa 270

                                                                       
Query: 421 tataatggaaagaaagatgaattgaattaaattgattaaattgaatattcctcttctgag 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cataatggaaagaaagatgaattgaattaaattgattaaattgaatattcctcttctgag 210

                    
Query: 481 catttggtt 489
           |||||||||
Sbjct: 209 catttggtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 887
Length adjustment: 10
Effective length of query: 479
Effective length of database: 877
Effective search space:   420083
Effective search space used:   420083
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)