Query= MSMg01no428_k12.b1 MSMg01no428_k12.b1 CHROMAT_FILE:
MSMg01no428_k12.b1 PHD_FILE: MSMg01no428_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:54 2005
(237 letters)
>mm_chr2_140478923_140479559
Length = 637
Score = 427 bits (221), Expect = e-124
Identities = 233/237 (98%)
Strand = Plus / Plus
Query: 1 tcatcacctaaagaaagataatcaacaatgcttgtgcctaacctacgtattaaagattgc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tcatcacctaaagaaagataatcaacaatgcttgtgcctaacctacgttttaaagattgc 260
Query: 61 taatatgtattaaaaaatgcttcaataaaagacctttgctaggcttttgtttcacccaga 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatatgtattaaaaactgcttcaataaaagacctttgctaggcttttgtttcacccaga 320
Query: 121 cttccctggatgtatattttaacactaatccccacttcaaggatataaaactgagaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 cttccctggatgtatattttaacactaatccccacttcaaggatataaaactgagaagtt 380
Query: 181 gcatcagtgatctgaactggcttcagctttgcagtgtcaaaactgcccaagccacag 237
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatcagtgacctgaactggcttcagctttgcagtgtcaaaactgcccaagccacag 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_k12.g1 MSMg01no428_k12.g1 CHROMAT_FILE:
MSMg01no428_k12.g1 PHD_FILE: MSMg01no428_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:54 2005
(242 letters)
>mm_chr2_140629158_140629798
Length = 641
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 attcacctctatcgccttcatcctctgatgctatcaccctctgttgccttagcctgctga 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 attcacctctatcgccttcatcctctgatgccatcaccctctgttgccttagcctgctga 382
Query: 61 tgaattcattttctgttgccctcaagttttgatgctataaatgatagatttttaaatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaattcattttctgttgccctcaagttttgatgctataaatgatagatttttaaatatt 322
Query: 121 catgatctaattctgaggtcatacaaaattggaggcaggcaactgggaaaggacttgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 catgatctaattctgaggtcatacaaaattggaggcaggcaactgggaaaggacttg-ga 263
Query: 181 tgatagaggcttatttgacaagtaattaaacttgtctacaaataaagctacaaagtaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgatagaggcttatttgacaagtaattaaacttgtctacaaataaagctacaaagtaaga 203
Query: 241 aa 242
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 641
Length adjustment: 9
Effective length of query: 233
Effective length of database: 632
Effective search space: 147256
Effective search space used: 147256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
