Query= MSMg01no429_c18.b1 MSMg01no429_c18.b1 CHROMAT_FILE:
MSMg01no429_c18.b1 PHD_FILE: MSMg01no429_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:34 2005
(547 letters)
>mm_chr2_66018136_66019082
Length = 947
Score = 911 bits (471), Expect = 0.0
Identities = 536/593 (90%), Gaps = 54/593 (9%)
Strand = Plus / Minus
Query: 9 ggaattcttcatgtatttctttgttcctggttgtggttgctggaagtcgggccctcctga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggaattcttcatgtatttctttgttcctggttgtggttgctggaagtcgggccctcctga 535
Query: 69 cttgagctggggagtggcagggtgtggcactgtgacgtaataaatcacacataaatctta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cttgagctggggagtggcagggtgtggcactgtgacgtaataaatcacacataaatctta 475
Query: 129 ggagcaaaaatgtgccacctacctcctaatgcttttattcagaaccagatgttcttttag 188
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggagcaaaaatgtgctacctacctcctaatgcttttattcagaaccagatgttcttttag 415
Query: 189 agaaatgcttcaagctacgatctgccttcccgtgctcgcgcatcagcgcatctggcaccg 248
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 414 agaaatgcttcaagctacgatctgccttcccgtgctcgcgcatcagcgcatctggcacag 355
Query: 249 tgcctgtgaatgtaatctgagcccataaatgagaaaagctgagtaaccagaggattgctg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgcctgtgaatgtaatctgagcccataaatgagaaaagctgagtaaccagaggattgctg 295
Query: 309 agagcctccttccgaggggacggcctcaggagagaaggcagtctttaagtcaatcaattt 368
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 294 agagcctccttccgaggggacggcctcaggagggaaggcagtctttaagtcaatcaattt 235
Query: 369 tcacatagtgttatttttatcgtcttaaaagcaaaaaaaaaaaa---------------- 412
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcacatagtgttatttttatcgtcttaaaagcaaaaaaaaaaaaaaaaaagaaagaaaga 175
Query: 413 --------------------------------------gaaagaaagaaaagaaattttg 434
||||||||||||||||||||||
Sbjct: 174 aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaagaaattttg 115
Query: 435 gcaatcttaaactgtttttaagaaagcagggatattttgagaaagtaattactacttccg 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gcaatcttaaactgtttttaagaaagcagggatattttgagaaagtaattactacttccg 55
Query: 495 tttctgcccaaggcagcctagttgtatttttaatgtgggaagtgatgtaagag 547
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tttctgcccaaggcagcctagttgtatttttaatgtgggaagtgatgtaagag 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_c18.g1 MSMg01no429_c18.g1 CHROMAT_FILE:
MSMg01no429_c18.g1 PHD_FILE: MSMg01no429_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:34 2005
(432 letters)
>mm_chr2_65836268_65837099
Length = 832
Score = 835 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 ttttatataacatgatgtaaattctgttatttattgatatcctttccttcgtgttgtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttatataacatgatgtaaattctgttatttattgatatcctttccttcgtgttgtgag 260
Query: 61 tttatccattttctaacttttggagctttactgctttggttttgggaagagtgtctcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatccattttctaacttttggagctttactgctttggttttgggaagagtgtctcact 320
Query: 121 gtgtcatacatgcttctgggtccccctgcaagagctgtcttctgggaggtaaaatgtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtcatacatgcttctgggtccccctgcaagagctgtcttctgggaggtaaaatgtgac 380
Query: 181 atcattgtgattagatgcttttgtttcagtgtgataattgtggttgaataaaaggcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcattgtgattagatgcttttgtttcagtgtgataattgtggttgaataaaaggcaata 440
Query: 241 aactgaaagatgcttcaaattggtgtgaaatatgaaaactgccttttggaaagtagtatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactgaaagatgcttcaaattggtgtgaaatatgaaaactgccttttggaaagtagtatt 500
Query: 301 aaaagccacattctccagtctttctctttcttgcccttgacctcactgtgtaaactgact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaagccacattctccagtctttctctttcttgcccttgacctcactgtgtaaactgact 560
Query: 361 tgaactccatagccacacaaagtggggttcatttattctgtaacaggcacaaagggctag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaactccatagccacacaaagtggggttcatttattctgtaacaggcacaaagggctag 620
Query: 421 ataggtatatca 432
||||||||||||
Sbjct: 621 ataggtatatca 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
