Query= MSMg01no429_j07.b1 MSMg01no429_j07.b1 CHROMAT_FILE:
MSMg01no429_j07.b1 PHD_FILE: MSMg01no429_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:07 2005
(481 letters)
>mm_chr2_71993305_71994186
Length = 882
Score = 855 bits (442), Expect = 0.0
Identities = 472/482 (97%), Gaps = 1/482 (0%)
Strand = Plus / Plus
Query: 1 aatccttttaggtttaagaggtaagacaatgctgtataaacagtgctgtctttatttggc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatccttttaggtttaagcggtaagacaatgctgtataaacagtgctgtctttatttggc 260
Query: 61 agagatttgctttagaatgaagcctaccatataaaaacgtttaagctacacaaaccagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagatttgctttagaatgaagcctaccatataaaaacgtttaagctacacaaaccagag 320
Query: 121 aattgtagtagtcccaaagtttgataaagcgagaagcaaggttcatggggagtcttagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattgtagtagtcccaaagtttgataaagcgagaagcaaggttcatggggagtcttagaa 380
Query: 181 ccccaaggcaagtgtccagagaggtctgtgtcgctcagcaaatcctaactccctc-acgc 239
|||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||
Sbjct: 381 ccccgaggcaagtgtccagagaagtctgtgtcgctcagcaaatcccaactccctccatgc 440
Query: 240 tctgtctgtaagtcccagtacatcacctggggctttgggtgaggtagtcagtcagatggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtctgtaagtcccagtacatcacctggggctttgggtgaggtagtcagtcagatggg 500
Query: 300 aataaggtccttggtgctttctgttactcagcactcctaaagtgctccaccctggtgtgg 359
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 501 aataaggtccttggtgctttctgttactcagtgctcctacagtgctccaccctggtgtgg 560
Query: 360 tcaaaggctttaatcaaggggctgtgacaattagcatatcccacccaagatgctgtgaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaaaggctttaatcaaggggctgtgacaattagcatatcccacccaagatgctgtgaaa 620
Query: 420 atctgtgactatcatgtccaaagtcctcaagtttctagtcaatgaaagagcagaatgaca 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 atctgtgactatcatgtccaaagtcctcaagtttctagtcgatgaaagagcagaatgaca 680
Query: 480 tt 481
||
Sbjct: 681 tt 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space: 410712
Effective search space used: 410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_j07.g1 MSMg01no429_j07.g1 CHROMAT_FILE:
MSMg01no429_j07.g1 PHD_FILE: MSMg01no429_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:07 2005
(245 letters)
>mm_chr2_72156440_72157084
Length = 645
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%)
Strand = Plus / Minus
Query: 1 atcttcctccataaacacgtctcctggataagaatttgccatccccagctgcaatgctgc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcttcctccataaacacatctcctggataagaatttgccatccccagctgcaatgctgc 386
Query: 61 tgacagcttcttcatccactgcctcacagaaggcctttttcaccatgttagtattccact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgacagcttcttcatccactgcctcacagaaggcctttttcaccatgttagtattccact 326
Query: 121 gtcagctgctgctgaaggaaaccactcacagtccaggaagtgaagcaatcgtctcatatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 gtcagctgctgctgaaggaaaccactcacagtccaggaagtgaagcaatcgtctcatagc 266
Query: 181 agtggtgggattaactacgccaaactcaccacacagccctcccctcaagcagcaactgac 240
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 agtggtgggattaactaagccaaactcaccacacagccctccccttaagcagcaactgac 206
Query: 241 tagca 245
|||||
Sbjct: 205 tagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
