MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-431C11
Chromosome	2 (Build37)
Map Location	79,976,971 - 79,977,394
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040526, Itga4, Cerkl, Neurod1, Ssfa2, Ppp1r1c, Pde1a, LOC668005
Downstream gene	Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040526 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040526
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Itga4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16401 MGI:96603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cerkl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228094 MGI:3037816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Neurod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18012 MGI:1339708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ssfa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70599 MGI:1917849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp1r1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75276 MGI:1923185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18573 MGI:1201792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC668005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Prdx6-rs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320769 MGI:1336888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66861 MGI:1914111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Frzb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20378 MGI:892032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nckap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50884 MGI:1355333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC624223 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624223
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins pseudo : _no_value

name	Dusp19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68082 MGI:1915332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672381 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 614 ESTs, 8 Proteins

name	Nup35 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69482 MGI:1916732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC103324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:103324
definition	note : hypothetical protein LOC103324 pseudo : _no_value

name	LOC668027 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040624 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Itga4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326553 GeneID:16401 MGI:96603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha 4 transcript_id : NM_010576.3

name	Cerkl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326540 GeneID:228094 MGI:3037816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceramide kinase-like transcript_id : NM_001048176.1

name	Neurod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387581 GeneID:18012 MGI:1339708
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurogenic differentiation 1 transcript_id : NM_010894.2

name	Ssfa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37620166 GeneID:70599 MGI:1917849
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm specific antigen 2 transcript_id : NM_080558.3

name	Ppp1r1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352812 GeneID:75276 MGI:1923185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1, regulatory (inhibitor) subunit 1C transcript_id : NM_172420.3

name	Pde1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801836 GeneID:18573 MGI:1201792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 1A, calmodulin-dependent transcript_id : NM_016744.3

name	Pde1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58036490 GeneID:18573 MGI:1201792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 1A, calmodulin-dependent transcript_id : NM_001009978.1

name	Pde1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58036492 GeneID:18573 MGI:1201792
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 1A, calmodulin-dependent transcript_id : NM_001009979.1

name	Prdx6-rs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385325 GeneID:320769 MGI:1336888
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxiredoxin 6, related sequence 1 transcript_id : NM_177256.3

name	Dnajc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119508442 GeneID:66861 MGI:1914111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 10 transcript_id : NM_024181.2

name	Frzb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364591 GeneID:20378 MGI:892032
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frizzled-related protein transcript_id : NM_011356.3

name	Nckap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131112 GeneID:50884 MGI:1355333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NCK-associated protein 1 transcript_id : NM_016965.2

name	Dusp19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345719 GeneID:68082 MGI:1915332
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 19 transcript_id : NM_024438.3

name	LOC672381 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249862 GeneID:672381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 614 ESTs, 7 Proteins product : similar to SMT3B protein, transcript variant 1 transcript_id : XM_001476458.1

name	LOC672381 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249864 GeneID:672381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 336 ESTs, 2 Proteins product : similar to SMT3B protein, transcript variant 2 transcript_id : XM_001476473.1

name	Nup35 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361375 GeneID:69482 MGI:1916732
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 35 transcript_id : NM_027091.2

name	Itga4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326554 CCDS:CCDS16168.1 GeneID:16401 MGI:96603
definition	GO_component : GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0001974 - blood vessel remodeling [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IMP]; GO:0016477 - cell migration [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 note : integrin alpha 4 (Cd49d); VLA-4 receptor, alpha 4 subunit product : integrin alpha 4 protein_id : NP_034706.3

name	Cerkl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326541 GeneID:228094 MGI:3037816
definition	codon_start : 1 note : retinitis pigmentosa 26 (autosomal recessive) product : ceramide kinase-like protein_id : NP_001041641.1

name	Neurod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563268 CCDS:CCDS16169.1 GeneID:18012 MGI:1339708
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IGI]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : neurogenic differentiation 1 protein_id : NP_035024.1

name	Ssfa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37620167 CCDS:CCDS16170.1 GeneID:70599 MGI:1917849
definition	codon_start : 1 exception : mismatches in translation product : sperm specific antigen 2 protein_id : NP_542125.2

name	Ppp1r1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29150268 CCDS:CCDS16171.1 GeneID:75276 MGI:1923185
definition	GO_function : GO:0004864 - protein phosphatase inhibitor activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : protein phosphatase 1 regulatory (inhibitor) subunit 1C product : protein phosphatase 1, regulatory (inhibitor) subunit 1C protein_id : NP_766008.2

name	Pde1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49457849 CCDS:CCDS16172.1 GeneID:18573 MGI:1201792
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : phosphodiesterase 1A, calmodulin-dependent protein_id : NP_058024.2

name	Pde1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58036491 CCDS:CCDS16173.1 GeneID:18573 MGI:1201792
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform PDE1A7 is encoded by transcript variant 7 product : phosphodiesterase 1A, calmodulin-dependent isoform PDE1A7 protein_id : NP_001009978.1

name	Pde1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58036493 CCDS:CCDS16174.1 GeneID:18573 MGI:1201792
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform PDE1A9 is encoded by transcript variant 9 product : phosphodiesterase 1A, calmodulin-dependent isoform PDE1A9 protein_id : NP_001009979.1

name	Prdx6-rs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916703 GeneID:320769 MGI:1336888
definition	codon_start : 1 note : anti-oxidant protein 2 related sequence 1; peroxiredoxin 5 related sequence 1; 1-cysPrx-P1 product : peroxiredoxin 5 related sequence 1 protein protein_id : NP_796230.1

name	Dnajc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119508443 GeneID:66861 MGI:1914111
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : ER-resident protein ERdj5 product : DnaJ (Hsp40) homolog, subfamily C, member 10 protein_id : NP_077143.2

name	Frzb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755476 CCDS:CCDS16176.1 GeneID:20378 MGI:892032
definition	GO_component : GO:0005576 - extracellular region [Evidence NAS] GO_function : GO:0017147 - Wnt-protein binding [Evidence IDA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IDA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : secreted frizzled-related sequence protein 3 product : frizzled-related protein protein_id : NP_035486.1

name	Nckap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28395023 CCDS:CCDS16177.1 GeneID:50884 MGI:1355333
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0030032 - lamellipodium biogenesis [Evidence IDA] codon_start : 1 product : NCK-associated protein 1 protein_id : NP_058661.1

name	Dusp19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277360 CCDS:CCDS16178.1 GeneID:68082 MGI:1915332
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008579 - JUN kinase phosphatase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence IDA]; GO:0008330 - protein tyrosine/threonine phosphatase activity [Evidence IDA] GO_process : GO:0000188 - inactivation of MAPK activity [Evidence IDA]; GO:0007254 - JNK cascade [Evidence IDA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IDA] codon_start : 1 product : dual specificity phosphatase 19 protein_id : NP_077758.1

name	LOC672381 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249865 GeneID:672381
definition	codon_start : 1 product : similar to SMT3B protein isoform 2 protein_id : XP_001476523.1

name	LOC672381 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249863 GeneID:672381
definition	codon_start : 1 product : similar to SMT3B protein isoform 1 protein_id : XP_001476508.1

name	Nup35 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037163 CCDS:CCDS16179.1 GeneID:69482 MGI:1916732
definition	GO_component : GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : nucleoporin 35 protein_id : NP_081367.1

name	LOC100040526 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040526
definition	number : 1 pseudo : _no_value

name	LOC668005 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668005
definition	number : 1 pseudo : _no_value

name	LOC668027 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668027
definition	number : 2 pseudo : _no_value

name	LOC668027 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668027
definition	number : 1 pseudo : _no_value

name	LOC100040624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040624
definition	number : 3 pseudo : _no_value

name	LOC100040624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040624
definition	number : 2 pseudo : _no_value

name	LOC100040624 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040624
definition	number : 1 pseudo : _no_value

name	LOC100040655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040655
definition	number : 4 pseudo : _no_value

name	LOC100040655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040655
definition	number : 3 pseudo : _no_value

name	LOC100040655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040655
definition	number : 2 pseudo : _no_value

name	LOC100040655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040655
definition	number : 1 pseudo : _no_value

name	LOC624223 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249861 GeneID:624223
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins product : similar to ribosomal protein L15 pseudo : _no_value transcript_id : XR_032728.1

clone name	MSMg01-104M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098L03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-412M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538C04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-331F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-467C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514A24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-339O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061J17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-058J12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-317O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100I11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048I09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-495M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040I06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-431C11.T7 (MSMg01no431_c11.b1)	MSMg01-431C11.TJ (MSMg01no431_c11.g1)
ACC	AG523478	AG523479
length	731	1,076
length of high quality (start - end)	667 (62 - 728)	---
definition	CHROMAT_FILE: MSMg01no431_c11.b1 PHD_FILE: MSMg01no431_c11.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:54:20 2005	CHROMAT_FILE: MSMg01no431_c11.g1 PHD_FILE: MSMg01no431_c11.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:54:20 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTGCGGCCGCTATACGACTCCTATATTCAGAGAATCCGCGGAATTCTGGA TTATATCCTGTGAGGTGGGTGGGTCCCCTCAACCAGGGGCCATACCTATC CACTGGATATGCTCTTTACAGTTTCTATCTCACCTTTGTTGGATATTCGG CTAATGTCCTCCCTTTTGGGGTCCTGGGAACCTCTTAGGACTTTCTAGTG GCTACCCCCAGTTCCCCTCCCCTACTGCTACAAACCTCCCTTGAAATTCC TGACCCTCTGTACTTCTCCCCCATCTCCTATCTTCCCTTATCTTAACTGG TCCCCCCTTTTCTTTCCTAGATCCCTTGCTCCCTCTACTCCCCAAGATTA TTTTCTTCCCCCTTTTGAGTAGACCTGTAGTATCCACATTTCTTTTCTAA TGGTAAGATCATTTCAACATACAATGGATTCTTTTCTCACTTACATTTTG ACTTTTTTCTTTCAACCTGGAGGCGAATAAAATGTGGAGTGTAAAAAAAA AAGATGAAATAAACTTGCTTAATTTAAAGAAAGAAAGAAAGGAAAAGAAG AGCTTGAACATAGACCTAACGCTGGACACCTCCAGGATTTAAAGTCCGTG GGGTCGCTCACTTTTTACTCACAATAGGTTGATTGATGAGATTTACAGTT TTGAATTTGTAACTAACATTTGGTTGAAATTTACTTGTAACAATTTATAG CACTATGTTTGTAAATTTATCCCTCTCAAGN	GGGAGAAGACTGGGATAGGAGAGTGGAGGAATAGGCCTTTCTCGTATAAT GTGATGAGCGGACATGATAAGGGAGATGGAGTCCACGGGGGTAACGTCGG AAGCGCACGGCGCATCGATAGACCGAGGGGAGACAGCGCGCATATGTTGC TGTGGGAAGAAGGAAGCTCTAGTCCAATTGGAGGCCTAGGAGGGTCGTCG ACCAGTTTTATGCACATAGTAAAAGTCAGGGATGAAGTCCCACACAATAT CTAACTAGACATACTAGGGTATGAGTAAGCATGCCCTTCACGAGGGGATG GCCGCTTTAGAATGTGAGTGGAGAGAGAGAGCGAAAGAGCAACCAATAGA ACCTCAGTGTAGGAACGCGCTCGGGATGAGACGCCTAGCAGCGTCCATCC TGTTCCTACCCTGTGGGATTAGCGAACACGCCCGGGCAACACCTCGTATG ATGTTATATACGCGGTCCAGCTATGTATCGTGAATAACACTACGTTATTA TCATAGGCAACATGCGAACGATGAATAAATCTGACCACCCATACCCCTTA TTGATTGACTATATTCCCCGTATTACACCTTCTCCGCGTATATTAGTATA CCCAACTAACTGCGTAACGCGGTATGTTATAAACAGTCAAATAGTGATCG TCCCATAGTGATCCTATAAAGCGCCGTAGCAGCGACTCACAAATTATGAA GANCTGCAATCGCGACGCCCTCGCTCAGAATGACACGTATTGGCCTGAGT ATATCGCACGTTTATAGATCCGGTACATTTCGCCACGCAACGAGCATACT TAAACTACATACAGCTGGTAATCCGGAGAGAGGTTAGTAGAGAAGCGGCC GCGAAGGATGTTCCCGAATGGCGGAGAGCAATATATCCCCAATAGATGCA AACATTCCGGCCGGCGGACGCAGGTTCAATACGGTGGCGAGTATGCGTCG TGCAGGGATGCGTGCTAATGCGCGCATTACTAGCACGCTATACACCGGCC GCATGCGCGCAGATCTACGGCTCTTTTTCGCCAGAGAACGAGCTTTGGCA ATAGAGAGAAGTAGGAGGGCATAATA
quality values	Open. Hide. 15 15 13 15 13 7 7 7 17 19 20 20 20 18 13 25 28 23 10 10 10 19 19 9 9 9 12 9 9 7 8 8 8 9 9 11 14 18 27 30 28 23 22 32 30 30 47 37 37 19 17 7 7 6 6 6 6 6 6 11 15 15 26 26 30 30 30 37 39 53 57 57 57 57 57 57 59 42 42 29 28 28 42 42 48 48 48 54 51 48 47 48 48 53 54 68 68 68 42 42 41 41 32 40 48 51 50 50 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 57 57 50 57 57 57 57 68 68 68 68 51 50 50 50 50 50 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 57 57 40 37 28 28 37 43 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 47 46 47 47 25 17 8 8 8 8 8 22 18 28 28 36 50 50 50 53 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 44 44 42 42 43 59 59 68 68 57 57 54 54 54 57 59 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 68 68 68 68 57 68 68 68 68 68 68 57 59 59 59 59 59 59 59 57 57 57 57 57 57 54 54 59 59 59 59 57 57 59 54 54 54 59 59 57 57 59 59 59 54 54 57 59 59 59 59 59 59 59 59 57 54 57 54 48 48 48 48 59 59 59 47 43 43 59 59 59 59 59 57 57 57 50 50 50 48 48 48 48 39 39 39 39 37 37 47 48 47 47 42 41 39 39 35 32 36 41 59 59 47 47 37 41 43 43 48 48 59 57 57 57 57 39 39 35 35 35 39 39 57 43 59 48 43 39 40 40 48 48 57 48 48 48 37 37 30 32 32 33 34 28 32 32 39 39 39 39 37 31 29 37 34 34 28 22 22 30 29 31 31 37 37 37 34 34 28 18 13 17 17 34 25 29 30 30 32 31 39 39 39 39 37 35 20 19 22 22 22 19 23 32 33 33 30 30 37 37 39 41 39 37 36 35 28 25 18 16 14 18 21 22 20 25 37 37 25 25 28 28 18 23 15 12 9 3 0	Open. Hide. 8 8 8 8 6 8 6 6 8 8 8 8 10 8 10 8 8 8 6 6 8 7 8 8 10 10 10 10 8 8 8 8 6 6 6 6 10 13 7 7 6 6 6 6 8 8 8 9 9 8 8 6 6 8 8 7 6 6 8 10 13 10 13 9 8 8 8 8 8 10 10 8 9 9 12 11 8 8 8 8 10 10 11 8 6 6 6 8 8 8 6 6 8 6 8 8 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 8 6 6 6 6 8 8 8 6 6 8 8 6 6 8 10 10 9 7 10 8 11 8 8 6 6 8 8 8 8 8 8 8 10 13 8 8 8 8 10 8 8 8 9 9 8 8 6 6 8 8 8 8 8 8 8 9 9 9 8 8 8 8 10 9 10 10 10 10 9 8 8 8 8 8 8 8 7 6 8 8 6 6 8 8 10 10 10 12 10 10 9 9 10 10 9 10 13 9 8 8 8 8 8 6 6 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 10 10 10 10 10 11 8 8 8 8 8 9 10 10 9 10 8 8 8 8 10 7 6 8 8 9 8 8 8 8 8 8 15 15 14 12 10 8 8 8 8 8 8 8 8 8 8 8 9 10 10 10 9 8 10 9 9 7 7 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 9 8 11 8 8 8 8 8 8 10 10 8 8 8 8 8 9 9 8 6 6 6 8 8 8 8 9 9 8 8 9 9 9 9 11 8 8 8 10 8 8 10 11 11 11 10 8 8 8 8 8 8 8 10 10 8 8 8 6 8 6 6 8 8 10 9 9 8 8 8 8 8 8 10 10 10 10 13 16 11 10 11 8 8 6 6 6 8 8 8 8 8 10 8 8 8 8 9 10 11 11 11 12 8 8 8 8 8 9 12 8 11 10 8 8 8 8 8 7 6 6 8 8 8 8 8 8 8 6 6 8 6 9 9 9 8 8 10 10 10 10 8 6 6 6 8 8 9 10 9 8 8 6 6 8 8 10 10 6 7 6 6 8 8 10 11 9 9 8 8 8 8 11 8 8 6 6 8 8 8 10 8 10 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 7 7 10 12 11 15 8 8 8 8 6 6 8 8 8 8 10 13 14 12 12 12 14 14 9 9 9 8 8 8 8 8 8 9 9 9 12 12 10 9 8 8 8 8 8 11 8 8 8 8 8 8 8 8 8 8 8 8 10 10 12 6 6 8 8 8 8 8 8 8 8 12 12 9 7 8 8 6 6 8 10 8 8 8 8 8 8 6 6 6 8 9 11 11 11 11 9 8 8 8 8 8 8 9 9 9 8 8 10 8 8 6 8 8 8 8 10 10 10 10 10 10 10 9 9 8 8 8 8 8 9 9 11 8 10 8 10 10 10 8 8 8 8 8 8 8 9 8 8 8 8 8 8 6 6 8 8 12 15 13 10 10 10 8 8 9 9 8 8 10 8 9 8 8 8 8 8 10 8 12 9 9 8 10 8 8 8 10 8 8 8 8 10 8 3 0 3 8 8 8 9 10 9 9 9 10 8 8 8 8 8 8 8 8 8 7 9 8 8 6 6 7 8 8 8 8 10 12 8 8 6 6 8 8 10 10 13 10 8 8 6 6 6 6 8 6 8 8 8 8 8 8 8 9 8 8 8 8 8 8 6 6 8 8 11 10 10 11 10 11 12 13 10 8 8 8 8 8 9 9 9 9 8 8 6 6 8 6 8 10 8 8 8 8 8 8 8 10 10 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 10 8 8 10 11 11 10 8 8 8 9 8 8 9 9 9 10 8 10 8 8 8 6 10 6 6 8 8 10 10 10 8 8 8 9 10 10 8 8 8 8 10 8 8 9 11 8 8 6 6 6 6 8 8 8 8 9 10 8 13 11 11 10 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 10 10 8 8 8 8 7 7 7 7 6 6 8 8 8 8 8 8 8 8 8 8 9 9 10 10 10 8 8 6 6 8 8 8 7 6 6 6 8 8 10 8 8 8 8 8 10 9 9 9 8 8 6 6 8 8 8 8 8 8 10 10 10 10 10 10 8 8 8 10 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 6 6 6 8 8 8 10 10 8 10 8 8 8 8 8 8 8 8 10 7 6 6 6 6 6 8 8 6 6 6 6 6 6 7 8 8 8 8 8 9 9 9 10 9 9 9 9 9 6 6 6 8 8 8 11 8 8 7 6 8 8 8 6 6 8 8 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no431_c11.b1 MSMg01no431_c11.b1 CHROMAT_FILE:
MSMg01no431_c11.b1 PHD_FILE: MSMg01no431_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:20 2005
         (667 letters)



>mm_chr2_79976328_79977394
          Length = 1067

 Score =  758 bits (392), Expect = 0.0
 Identities = 417/426 (97%), Gaps = 3/426 (0%)
 Strand = Plus / Minus

                                                                        
Query: 243  ccccttttctttcctagatcccttgctccctctactccccaagattattttcttccccct 302
            |||||||||  ||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 1067 ccccttttccctcctagatctcttgctccctcttctccccaagattattttcttccccct 1008

                                                                        
Query: 303  tttgagtagacctgtagtatccacatttctttt-ctaatggtaagatcatttcaacatac 361
            |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1007 tttgagtagaactgtagtatccacatttcttttcctaatggtaagatcatttcaacatac 948

                                                                        
Query: 362  aatggattcttttctcacttacattttgacttttttctttcaacctggaggcgaataaaa 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947  aatggattcttttctcacttacattttgacttttttctttcaacctggaggcgaataaaa 888

                                                                        
Query: 422  tgtggagtgtaaaaaaaaaagatgaaataaacttgcttaatttaaagaaagaaagaaagg 481
            |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887  tgtggagtg--caaaaaaaagatgaaataaacttgcttaatttaaagaaagaaagaaagg 830

                                                                        
Query: 482  aaaagaagagcttgaacatagacctaacgctggacacctccaggatttaaagtccgtggg 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829  aaaagaagagcttgaacatagacctaacgctggacacctccaggatttaaagtccgtggg 770

                                                                        
Query: 542  gtcgctcactttttactcacaataggttgattgatgagatttacagttttgaatttgtaa 601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769  gtcgctcactttttactcacaataggttgattgatgagatttacagttttgaatttgtaa 710

                                                                        
Query: 602  ctaacatttggttgaaatttacttgtaacaatttatagcactatgtttgtaaatttatcc 661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709  ctaacatttggttgaaatttacttgtaacaatttatagcactatgtttgtaaatttatcc 650

                  
Query: 662  ctctca 667
            ||||||
Sbjct: 649  ctctca 644


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information