Query= MSMg01no431_o08.b1 MSMg01no431_o08.b1 CHROMAT_FILE:
MSMg01no431_o08.b1 PHD_FILE: MSMg01no431_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:24 2005
(451 letters)
>mm_chr2_42232080_42232924
Length = 845
Score = 806 bits (417), Expect = 0.0
Identities = 437/447 (97%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 5 gaattcccactccctatcctagtctcctcctactttctgagtggatctgtctgcccacat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccactccctatcctagtctcctcctactttctgagtggatctgtctgcccacat 264
Query: 65 tcctgagttctgagttctcatttcaaataggtacttctctgttctcatgtctcagtctcc 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctgagttcttagttctcatttcaaataggtacttctctgttctcatgtctcagtctcc 324
Query: 125 ttcttttgatgctggatagaagctaaaaatgtattttcaatgtttcgggtttcctttctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcttttgatgctggatagaagctaaaaatgtattttcaatgtttcgggtttcctttctc 384
Query: 185 tctctacagccctacttcccgcctgcttacacagagtgggctccataaccttcacaccat 244
||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct: 385 tctctacagccctacttcctgcctgcttacacagagtgagctcc------ttcacaccat 438
Query: 245 gacgcaacacacagagggaggctttctttctttccaccattgtcctcatgcaggcagttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gacgcaacacacagagggaggctttctttctttccaccattgtcctcatgcaggcagttg 498
Query: 305 gagagattttcatctggccttccttggtagttattccttaaaactgaaataaacattatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gagagattttcatctggccttccttggtagttattccttaaaactgaaataaacattatt 558
Query: 365 tccatattttgaaacaaaaatcaaacaaaaacatgacactgataaaatgcaatagaataa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 559 tccatattttgaaacaaaaatcaaacaaaaacatgacactgataaaatgcaatggaataa 618
Query: 425 agactgaattaatgtcagggatcagat 451
|||||||||||||||||||||||||||
Sbjct: 619 agactgaattaatgtcagggatcagat 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 845
Length adjustment: 10
Effective length of query: 441
Effective length of database: 835
Effective search space: 368235
Effective search space used: 368235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_o08.g1 MSMg01no431_o08.g1 CHROMAT_FILE:
MSMg01no431_o08.g1 PHD_FILE: MSMg01no431_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:25 2005
(422 letters)
>mm_chr2_42372166_42372985
Length = 820
Score = 762 bits (394), Expect = 0.0
Identities = 415/424 (97%), Gaps = 6/424 (1%)
Strand = Plus / Minus
Query: 1 catggcaacgggaaccttttggtcatattgttaaccttggctttgacaggactctctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catggcaacgggaaccttttggtcatattgttaaccttggctttgacaggactctctgct 561
Query: 61 ggactcagttaagggagactcccagaatgcctgctgaatgttatttcatgttttgtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggactcagttaagggagactcccagaatgcctgctgaatgttatttcatgttttgtcact 501
Query: 121 tgtaattgcacatgtcagtgacaatttaaaaaatctagccgacaccactgaattatgtgg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 500 tgtaattgcacatgtcagtgacaatttaaacaatctagccgacaccactgaattatgtgg 441
Query: 181 tgtatataaatcttccatatcaggtagattttaaattgatactatcaagctaagagtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtatataaatcttccatatcaggtagattttaaattgatactatcaagctaagagtgga 381
Query: 241 ataaagaa--tttcaccctcgacgcccaatagctggaaatgattttatgtttcattagtt 298
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 ataaagaagc---caccctcgacgcccaatagctggaaatgattttatgtctcattagtt 324
Query: 299 tagaaatgtgatcttacccacccactttaaaaataaaaagtgcatgaacatatttcttct 358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 323 tagaaatgtgatcttacccacccactttaaaaataaaacgtgcatgaacatatttcttct 264
Query: 359 gggataagttgttaattatatgggagaaagaggtcacctgatgaggtaaaaatctctgaa 418
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 263 gggataagttgttaattatatgggagaaagaggtcacctgatgaggt-aaaatctctgaa 205
Query: 419 aatt 422
||||
Sbjct: 204 aatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 820
Length adjustment: 9
Effective length of query: 413
Effective length of database: 811
Effective search space: 334943
Effective search space used: 334943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
