MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-432N19
Chromosome	2 (Build37)
Map Location	83,111,848 - 83,286,468
singlet/doublet	doublet
Overlap gene	LOC545429, Ppia-ps2_981.1, LOC100040818
Upstream gene	LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292, LOC433440, Fsip2
Downstream gene	LOC668077, Zc3h15, Itgav, Dnmt3l-ps1, D430039N05Rik, Zswim2, LOC668096, LOC668100, LOC545432, LOC668107, LOC668113, LOC668115, LOC668119, LOC383725, Calcrl, Tfpi
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041308 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 Protein

name	A130030D18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228116 MGI:2685404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	EG624362 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624362 MGI:3647772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC433550 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	LOC269292 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:269292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC433440 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Fsip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241516 MGI:2664111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins

name	LOC545429 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545429
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 599 ESTs, 9 Proteins pseudo : _no_value

name	Ppia-ps2_981.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606538
definition	note : peptidylprolyl isomerase A pseudogene 2_981.1 pseudo : _no_value

name	LOC100040818 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040818
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC668077 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Zc3h15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69082 MGI:1919747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itgav (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16410 MGI:96608
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnmt3l-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:445264 MGI:2674156
definition	note : DNA methyltransferase 3-like, pseudogene 1 pseudo : _no_value

name	D430039N05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241520 MGI:2444579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zswim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71861 MGI:1919111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668096 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 97 ESTs, 4 Proteins pseudo : _no_value

name	LOC668100 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668100
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 4 Proteins pseudo : _no_value

name	LOC545432 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 4 Proteins

name	LOC668107 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 4 Proteins pseudo : _no_value

name	LOC668113 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668113
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 98 ESTs, 4 Proteins pseudo : _no_value

name	LOC668115 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 98 ESTs, 4 Proteins pseudo : _no_value

name	LOC668119 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 96 ESTs, 4 Proteins pseudo : _no_value

name	LOC383725 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383725
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Calcrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54598 MGI:1926944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tfpi (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21788 MGI:1095418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041308 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249866 GeneID:100041308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 Protein product : similar to LOC639390 protein transcript_id : XM_001476538.1

name	A130030D18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249868 GeneID:228116 MGI:2685404
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA A130030D18 gene transcript_id : XM_001476546.1

name	LOC433440 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367070 GeneID:433440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to fibrous sheath-interacting protein 2 transcript_id : XM_485018.3

name	Fsip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249854 GeneID:241516 MGI:2664111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins product : fibrous sheath-interacting protein 2 transcript_id : XM_141020.6

name	Zc3h15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130305 GeneID:69082 MGI:1919747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger CCCH-type containing 15 transcript_id : NM_026934.3

name	Itgav (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680485 GeneID:16410 MGI:96608
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin alpha V transcript_id : NM_008402.1

name	D430039N05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803219 GeneID:241520 MGI:2444579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D430039N05 gene transcript_id : NM_175514.2

name	Zswim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803525 GeneID:71861 MGI:1919111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, SWIM domain containing 2 transcript_id : NM_027964.2

name	Calcrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055257 GeneID:54598 MGI:1926944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcitonin receptor-like transcript_id : NM_018782.1

name	Tfpi (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859643 GeneID:21788 MGI:1095418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tissue factor pathway inhibitor transcript_id : NM_011576.1

name	LOC100041308 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249867 GeneID:100041308
definition	codon_start : 1 product : similar to LOC639390 protein protein_id : XP_001476588.1

name	A130030D18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249869 GeneID:228116 MGI:2685404
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476596.1

name	LOC433440 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367071 GeneID:433440
definition	codon_start : 1 product : similar to fibrous sheath-interacting protein 2 protein_id : XP_485018.3

name	Fsip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249855 GeneID:241516 MGI:2664111
definition	codon_start : 1 product : similar to fibrous sheath-interacting protein 2 protein_id : XP_141020.6

name	Zc3h15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34368584 CCDS:CCDS16180.1 GeneID:69082 MGI:1919747
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence IDA] codon_start : 1 note : immediate early response, erythropoietin 4; novel zinc finger protein product : erythropoietin 4 immediate early response protein_id : NP_081210.2

name	Itgav (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680486 CCDS:CCDS16181.1 GeneID:16410 MGI:96608
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0008305 - integrin complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0001568 - blood vessel development [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : alphav-integrin; vitronectin receptor alpha polypeptide (VNRA) product : integrin alpha V protein_id : NP_032428.1

name	D430039N05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202059 CCDS:CCDS16182.1 GeneID:241520 MGI:2444579
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 product : hypothetical protein LOC241520 protein_id : NP_780723.1

name	Zswim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313666 CCDS:CCDS16183.1 GeneID:71861 MGI:1919111
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : zinc finger SWIM domain containing 2 product : zinc finger, SWIM domain containing 2 protein_id : NP_082240.1

name	Calcrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055258 CCDS:CCDS16184.1 GeneID:54598 MGI:1926944
definition	GO_function : GO:0004948 - calcitonin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence TAS]; GO:0007507 - heart development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0048661 - positive regulation of smooth muscle cell proliferation [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : calcitonin receptor-like receptor product : calcitonin receptor-like protein_id : NP_061252.1

name	Tfpi (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859644 CCDS:CCDS16185.1 GeneID:21788 MGI:1095418
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0030414 - protease inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA] codon_start : 1 product : tissue factor pathway inhibitor protein_id : NP_035706.1

name	LOC269292 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:269292
definition	number : 2 pseudo : _no_value

name	LOC269292 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:269292
definition	number : 1 pseudo : _no_value

name	LOC100040818 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040818
definition	number : 1 pseudo : _no_value

name	LOC100040818 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040818
definition	number : 2 pseudo : _no_value

name	LOC100040818 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040818
definition	number : 3 pseudo : _no_value

name	LOC100040818 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040818
definition	number : 4 pseudo : _no_value

name	LOC668077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668077
definition	number : 1 pseudo : _no_value

name	LOC668077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668077
definition	number : 2 pseudo : _no_value

name	LOC668077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668077
definition	number : 3 pseudo : _no_value

name	LOC383725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383725
definition	number : 1 pseudo : _no_value

name	LOC383725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383725
definition	number : 2 pseudo : _no_value

name	LOC383725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383725
definition	number : 3 pseudo : _no_value

name	Dnmt3l-ps1 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	note : Dnmt3l-ps1 pseudogene pseudo : _no_value

name	EG624362 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149249850 GeneID:624362 MGI:3647772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG624362 transcript_id : XR_035668.1

name	LOC433550 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249870 GeneID:433550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to mitochondrial ribosomal protein L18 pseudo : _no_value transcript_id : XR_032818.1

name	LOC545429 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249871 GeneID:545429
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 599 ESTs, 9 Proteins product : similar to ribosomal protein S4, X-linked pseudo : _no_value transcript_id : XR_032825.1

name	LOC668096 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249872 GeneID:668096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 97 ESTs, 4 Proteins product : hypothetical LOC668096 pseudo : _no_value transcript_id : XR_002134.2

name	LOC668100 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249873 GeneID:668100
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 4 Proteins product : hypothetical LOC668100 pseudo : _no_value transcript_id : XR_002136.2

name	LOC545432 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249874 GeneID:545432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 4 Proteins product : similar to CG12750-PA transcript_id : XR_001626.2

name	LOC668107 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249875 GeneID:668107
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 4 Proteins product : hypothetical LOC668107 pseudo : _no_value transcript_id : XR_002138.2

name	LOC668113 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249876 GeneID:668113
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 98 ESTs, 4 Proteins product : hypothetical LOC668113 pseudo : _no_value transcript_id : XR_002140.2

name	LOC668115 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249877 GeneID:668115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 98 ESTs, 4 Proteins product : hypothetical LOC668115 pseudo : _no_value transcript_id : XR_002141.2

name	LOC668119 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249878 GeneID:668119
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 96 ESTs, 4 Proteins product : hypothetical LOC668119 pseudo : _no_value transcript_id : XR_002143.2

clone name	MSMg01-078I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303F22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-334F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-205J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351M03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-432M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-432N19.T7 (MSMg01no432_n19.b1)	MSMg01-432N19.TJ (MSMg01no432_n19.g1)
ACC	AG524780	AG524781
length	832	739
length of high quality (start - end)	251 (66 - 316)	115 (75 - 189)
definition	CHROMAT_FILE: MSMg01no432_n19.b1 PHD_FILE: MSMg01no432_n19.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:56:45 2005	CHROMAT_FILE: MSMg01no432_n19.g1 PHD_FILE: MSMg01no432_n19.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:56:45 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(83,111,848 - 83,112,098)	(83,286,354 - 83,286,468)
sequence	AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCTAGAGGATCCGCGGAAT TCAAAACATTGCCCGCAAAAGTGTGATAGAATTTCAACATGTTTATCATC ACTTCTAGGAGAGACAGCCTCGAGGCAGAAGCTTCAATATGAATTTAAGC CTTGTAAAATAAACAAGAAAACAACCTTGAAGTTGTATATGTGAGAAGCA GTCAAATTCTCTAAACTTCTCCAAAATAACCATTTACAGAAAAATAAACA CTGCTTCCCTGGTGATATTTGCATAGTACTTTTACCTGAGATTAAGGTAT ATTACTGTCTAAGTAATTATTTACTGTAAACTCAAGACTGCTTCTTTATA TATCATAGCTGTTTGTGTAGCAGCATGGGATTTACTGAGTTTGATGAGTC ATTCCATCAACCACCCCCCGCACCTCTACTACGTTTTATATATTTCTGTC GCCCTTATCTCTTTTCCTTATTTTTCTCTCTCTACTCCTCTCTCCTCTTT TCTCTCCTATGTTTTCTCCCTTTCTCCCTTTTATCCCTTTCCTCTTCTCC TCTTCCTTTCTTCTACTTATTCCTCTCTTTTTTCCTTACTTTCTTCTCTC TTTATTATCCCATATCCTTATCTAATTATCCCTGCTTATATACCTTATAC GCCCCTCTCTTCTCTCCATACCTGCATTCTCTTTCTTTCTTCTCTTTTTC TTCTTTTTTTCCCTCTTTTATTCTCACCTCCCTTATCCTCTCTCCTGCTC CCACATTTTCCCTCTCCATTTCCTTCTTTCATCATCTTTAACATTTTCCT CTCCATGTTATATTTACTTTTCTTTTTTTTAT	TCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXTCTCTGAAAGGCTTGTGGGATGTTTG AGGCCATTTTTCTAGAGACTATGCCCATGGTCCCAGGCATACCTGCTGTG AAAGTGTTATTCAGTCACATTTGGCTCAGGACCTCATGGCATAGAACAGA ATAGCTTCCCCAGAGTCTCTTGAACCCATGTGGATTCAAAAAAAACTCCT TCCGTTTCGATTTGACAAAAAAAAAAAAGTCCCCAAAATTTTAAATAAAA ACTCCCTTTTCTTTATTTGTTTCCTTATNGAGGAAACCCCCCCCGTTTCC AATTTTTTTTTTTTTTTCTCCTCCTTTTTTCCCCCTCTTTTCTTTTTTTT GTTTCTGTTCCTCTAAATAAAAACACTTTTCCCCCTTTTTTCTTCTTTCC TTGGGCGCCCTTCCTCCTTTTTCTTTATTTTAATTACCTTCTTTTCCTCC CCTATTTAATTTTCTCCCTTCTCCCCTCCCTATTCCCCTGTTCTCTTATC CTTTAACTCACCTATTATATCTCCTCTCCTTTCCTCCCCCCTCTCTCTCT CTTCTTCTCTTCTTTTTCCCCCCCTCTTTCTCCCCTTTTTTCTACTCTCT TTTTTTCTTCTTTTTTCCTTCTACTTCCTTTTTCTTACTTCACATTTTTT CTTTCCTCCTTTCCTTTCCTCCTTCTCCTTTATCTATAT
quality values	Open. Hide. 14 14 14 16 16 16 21 22 16 21 16 16 19 29 16 19 10 10 10 22 30 37 22 13 8 8 8 19 17 9 8 8 8 10 9 9 14 17 21 19 19 18 18 21 28 32 19 19 17 19 28 25 27 26 19 15 8 8 8 8 8 9 10 10 11 19 26 34 33 33 28 28 28 32 32 36 36 36 36 36 37 37 37 47 40 40 40 50 57 57 50 50 54 53 42 42 40 41 41 42 42 42 50 57 57 57 57 57 57 57 57 48 48 48 47 47 46 46 43 46 43 57 57 57 57 57 57 57 59 59 68 57 57 57 47 47 47 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 59 59 57 50 50 50 50 50 50 59 52 52 52 57 59 52 52 52 52 52 52 57 57 57 57 68 57 57 54 54 54 57 57 57 57 57 57 57 57 57 57 57 57 68 68 59 59 59 43 43 50 59 59 68 68 68 68 68 57 57 57 57 57 59 59 59 57 57 57 57 57 57 57 57 48 48 48 48 48 57 57 57 57 54 54 57 57 44 47 47 48 48 50 50 46 46 39 39 46 48 48 57 57 57 57 59 59 59 68 57 57 57 57 57 57 59 59 57 57 48 40 39 25 25 17 30 30 57 57 50 50 50 50 59 59 34 34 25 32 32 26 27 27 25 23 23 26 26 37 37 39 37 48 48 48 48 48 59 59 39 22 15 10 10 8 8 10 9 9 10 9 9 16 13 10 10 10 20 25 37 46 48 43 43 34 39 39 39 35 33 24 29 29 34 28 28 35 39 39 47 40 32 32 18 18 12 19 12 14 12 23 12 12 10 11 11 9 8 8 7 7 10 15 22 17 14 8 8 8 8 10 8 8 10 8 8 8 13 10 12 13 12 14 11 8 8 8 8 8 8 10 10 10 8 8 8 6 6 8 10 10 12 13 8 8 6 6 8 8 8 8 6 6 8 8 8 8 8 7 9 9 8 10 8 8 8 8 8 8 10 10 6 6 6 7 8 8 8 8 8 8 10 10 12 10 8 8 8 8 8 13 11 14 10 10 10 12 12 15 15 16 13 17 9 9 9 12 9 8 6 7 8 8 8 10 16 11 8 8 6 6 8 8 6 7 11 12 10 8 8 6 6 6 6 12 8 8 8 8 11 15 13 13 8 8 8 8 9 10 9 10 9 8 8 11 10 8 8 9 18 11 12 12 11 6 7 6 6 8 8 10 17 8 8 8 8 8 8 8 10 13 9 9 9 14 9 10 11 10 9 8 8 10 10 9 8 8 8 10 6 9 10 10 16 13 16 18 10 10 12 11 10 10 8 6 6 10 12 10 10 10 10 10 9 9 8 10 12 8 6 6 8 8 6 6 8 8 8 8 9 8 8 8 8 10 8 8 8 8 8 8 8 8 8 10 8 8 10 10 11 10 10 13 8 8 6 7 8 8 10 11 11 16 15 9 9 9 9 9 9 11 11 10 10 10 8 8 8 8 8 10 6 6 6 6 8 8 8 8 8 8 8 6 6 6 6 8 6 8 12 11 12 12 10 14 7 7 6 6 6 6 7 11 10 10 10 11 10 10 10 10 13 16 14 14 8 8 8 8 8 10 7 7 8 8 11 13 14 12 10 6 6 6 6 10 11 11 10 10 12 10 10 10 13 12 8 8 8 8 8 8 11 8 8 8 8 8 8 8 8 9 9 9 16 12 12 9 9 10 12 13 13 10 8 8 8 11 10 8 9 8 9 14 15 10 8 6 6 6 8 8 10 10 10 10 9 9 9 9 12 12 12 18 18 19 9 9 8 10 10 10 8 6 8 6 8 8 6 6 8 10 8 8 8 10 13 10 8 6 6 6 6 8 9 11 16 11 12 12	Open. Hide. 6 6 6 7 8 11 11 9 9 18 3 0 3 12 12 23 29 22 28 29 27 23 19 20 20 24 29 39 19 23 9 9 6 6 6 6 6 7 8 8 10 19 19 23 25 22 27 27 28 27 25 30 33 33 33 33 33 21 19 11 9 6 6 6 6 7 15 26 16 13 14 21 27 29 41 47 47 59 59 32 32 32 32 37 33 37 37 37 47 59 48 23 23 12 22 19 33 37 37 59 44 44 29 26 21 25 30 30 59 42 47 40 48 43 44 43 48 48 43 43 48 41 46 33 33 33 30 30 26 41 44 37 37 37 37 36 37 43 48 48 48 48 41 41 40 41 47 44 22 12 12 12 12 15 19 24 22 22 30 34 30 26 22 24 33 20 23 10 10 10 10 15 15 25 31 28 34 30 22 22 21 20 22 35 31 27 23 19 19 11 11 13 12 8 8 8 8 8 8 8 8 8 8 8 10 10 12 11 7 6 6 6 6 6 11 11 10 8 8 8 10 12 11 11 11 9 9 9 7 12 6 9 9 8 8 8 8 8 8 16 18 25 19 14 8 10 8 8 8 8 10 9 11 11 9 9 9 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 9 10 8 8 8 8 7 8 12 17 10 8 8 8 8 10 9 9 9 8 10 6 6 6 10 10 8 10 10 8 8 8 10 11 10 10 12 10 10 8 8 8 8 10 8 8 6 8 8 8 8 8 8 10 3 0 3 6 8 8 8 8 8 9 10 8 10 8 8 8 8 11 8 8 10 10 8 8 8 8 8 15 34 37 34 39 37 37 22 21 16 10 10 9 11 9 9 9 10 10 8 8 8 8 8 8 13 10 15 10 10 9 9 15 9 9 10 10 15 15 10 15 12 22 9 8 8 8 8 10 8 8 8 8 8 10 8 10 8 13 13 8 8 10 8 8 8 10 10 10 9 8 8 8 8 8 8 8 8 8 9 9 9 9 10 13 12 17 10 10 9 9 8 13 15 13 11 10 13 9 9 9 9 9 10 11 8 8 7 7 8 8 8 8 17 10 8 10 9 10 8 8 8 8 10 10 8 8 8 8 10 8 10 8 8 8 10 10 21 10 10 10 10 10 10 11 11 10 9 9 9 9 10 9 10 9 10 11 11 12 12 12 13 10 8 8 6 6 8 10 11 8 8 8 8 9 8 8 8 8 10 10 10 10 11 10 10 8 10 8 8 8 8 9 9 9 12 12 15 12 8 8 6 6 8 8 6 6 8 6 9 9 12 8 6 6 6 8 8 8 10 10 10 8 8 10 8 8 6 8 10 10 10 12 12 12 15 11 11 10 9 8 9 9 9 9 9 14 13 11 10 8 13 7 7 8 8 11 12 11 11 11 10 10 10 12 12 16 22 13 10 10 10 10 10 10 10 9 8 8 8 8 8 9 20 12 10 6 6 8 8 8 8 12 10 8 8 8 13 17 13 10 10 10 11 9 9 9 9 9 9 13 10 11 17 22 22 19 10 9 9 10 10 12 22 19 19 12 9 9 9 9 10 10 9 9 10 10 10 6 6 8 10 14 15 13 8 8 10 11 12 8 8 6 6 8 8 8 8 8 8 12 18 10 8 12 8 8 8 10 7 7 9 10 14 8 11 10 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no432_n19.b1 MSMg01no432_n19.b1 CHROMAT_FILE:
MSMg01no432_n19.b1 PHD_FILE: MSMg01no432_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:45 2005
         (251 letters)



>mm_chr2_83111648_83112298
          Length = 651

 Score =  478 bits (247), Expect = e-139
 Identities = 250/251 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaaagtgtgatagaatttcaacatgtttatcatcacttctaggagagacagcctcgagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaagtgtgatagaatttcaacatgtttatcatcacttctaggagagacagcctcgagg 260

                                                                       
Query: 61  cagaagcttcaatatgaatttaagccttgtaaaataaacaagaaaacaaccttgaagttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaagcttcaatatgaatttaagccttgtaaaataaacaagaaaacaaccttgaagttg 320

                                                                       
Query: 121 tatatgtgagaagcagtcaaattctctaaacttctccaaaataaccatttacagaaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tatatgtgagaagcagtcaaattctctaaacttctccaaaataaccatttagagaaaaat 380

                                                                       
Query: 181 aaacactgcttccctggtgatatttgcatagtacttttacctgagattaaggtatattac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacactgcttccctggtgatatttgcatagtacttttacctgagattaaggtatattac 440

                      
Query: 241 tgtctaagtaa 251
           |||||||||||
Sbjct: 441 tgtctaagtaa 451


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space:   155364
Effective search space used:   155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no432_n19.g1 MSMg01no432_n19.g1 CHROMAT_FILE:
MSMg01no432_n19.g1 PHD_FILE: MSMg01no432_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:45 2005
         (115 letters)



>mm_chr2_83286154_83286668
          Length = 515

 Score =  223 bits (115), Expect = 4e-63
 Identities = 115/115 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctctgaaaggcttgtgggatgtttgaggccatttttctagagactatgcccatggtccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tctctgaaaggcttgtgggatgtttgaggccatttttctagagactatgcccatggtccc 256

                                                                  
Query: 61  aggcatacctgctgtgaaagtgttattcagtcacatttggctcaggacctcatgg 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aggcatacctgctgtgaaagtgttattcagtcacatttggctcaggacctcatgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 115
Length of database: 515
Length adjustment: 8
Effective length of query: 107
Effective length of database: 507
Effective search space:    54249
Effective search space used:    54249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information