Query= MSMg01no433_b08.b1 MSMg01no433_b08.b1 CHROMAT_FILE:
MSMg01no433_b08.b1 PHD_FILE: MSMg01no433_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:04 2005
(374 letters)
>mm_chr2_15473201_15473974
Length = 774
Score = 714 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Minus
Query: 5 ggaattccattatgccaattctaaattaaggtaatcactcaattacttaatgtaagttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggaattccattatgccaattctaaattaaggtaatcactcaattacttaatgtaagttaa 514
Query: 65 acacacaatattgaatgaatgaagttctttaagtaatgaataaatggaaatccaacccaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 acacacaatattgaatgaatgaagttctttaagtaatgaataaatggaaatccaacccaa 454
Query: 125 atgttagcaaaatagacatggtatggtgccaggaatttaggcatgaatttttttgtgcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atgttagcaaaatagacatggtatggtgccaggaatttaggcatgaatttttttgtgcta 394
Query: 185 catttataatcagaagtattttagaggatgaaataatacatatatttcatgtaaagatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 catttataatcagaagtattttagaggatgaaataatacatatatttcatgtaaagatat 334
Query: 245 caataaagatgctctgtctctgaccaattacacaggataaaataagggttaaaccaatat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caataaagatgctctgtctctgaccaattacacaggataaaataagggttaaaccaatat 274
Query: 305 aaaaataaaagttaaaaggaaactaatatgttcaagaatataaatttatctgtttattat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaaaataaaagttaaaaggaaactaatatgttcaagaatataaatttatctgtttattat 214
Query: 365 agaaattag 373
|||||||||
Sbjct: 213 agaaattag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_b08.g1 MSMg01no433_b08.g1 CHROMAT_FILE:
MSMg01no433_b08.g1 PHD_FILE: MSMg01no433_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:04 2005
(281 letters)
>mm_chr2_106851104_106851784
Length = 681
Score = 404 bits (209), Expect = e-117
Identities = 263/283 (92%), Gaps = 8/283 (2%)
Strand = Plus / Minus
Query: 1 agcactggcagaagaagctaa--ata-cagtgatgcgcgccacaggtaggtgttttcctc 57
|||||||||||||| |||||| ||| || ||| |||||||||||||||||| |||||
Sbjct: 479 agcactggcagaagcagctaaacatagca---atgtgcgccacaggtaggtgttctcctc 423
Query: 58 accaagtatgttgctatata-aggctttgaagacttcataaaagccgaatttgcagagcc 116
|||||||||||||| ||||| | |||||||||||||| |||||||| |||||||||||||
Sbjct: 422 accaagtatgttgcaatataca-gctttgaagacttcgtaaaagcccaatttgcagagcc 364
Query: 117 cttgcatggaatagccaatcaaagttggggcccatcctttagccaaaccacgaacgccat 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cttgcatggaatagccaatcaaagttggggcccatcctttagccaaaccacgaacgccat 304
Query: 177 cttctttcagtgtaatggagaatccattaaatatgcctttgtacttctgagggtccacct 236
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 303 cttctttcagtgtaatggagaatccattaaatatgcccttgcacttctgagggtccacct 244
Query: 237 gcatgcggtactttactaagtccaggggaacaacagcagtgtg 279
|||||||| | |||||||| ||||||||| |||||||||||||
Sbjct: 243 gcatgcggcattttactaaatccaggggagcaacagcagtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
