Query= MSMg01no433_i10.b1 MSMg01no433_i10.b1 CHROMAT_FILE:
MSMg01no433_i10.b1 PHD_FILE: MSMg01no433_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:38 2005
(247 letters)
>mm_chr2_72218380_72219026
Length = 647
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Minus
Query: 1 agcagaacgagtttgggaaccagtgcccctaatggcaaaatgaagacaccttcttgaacg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agcagaacgtgtttgggaaccagtgcccctaatggcaaaatgaagacaccttcttgaacg 387
Query: 61 gtgacactgcaaatcccatcagggcttgatttcaacactttcccccccacacaagtaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtgacactgcaaatcccatcagggcttgatttcaacactttcccccccacacaagtaagt 327
Query: 121 actgtgcagaatgcgaagagaagataatttatccttaaatcaagcagttgtactctaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actgtgcagaatgcgaagagaagataatttatccttaaatcaagcagttgtactctaatt 267
Query: 181 ctctggcaagctgaactccctcaccatgtgggttctctcacttacttcttaatgaacagc 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cactggcaagctgaactccctcaccatgtgggttctctcacttacttcttaatgaacagc 207
Query: 241 cccgga 246
||||||
Sbjct: 206 cccgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_i10.g1 MSMg01no433_i10.g1 CHROMAT_FILE:
MSMg01no433_i10.g1 PHD_FILE: MSMg01no433_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:38 2005
(244 letters)
>mm_chr2_72061879_72062524
Length = 646
Score = 358 bits (185), Expect = e-103
Identities = 219/243 (90%), Gaps = 22/243 (9%)
Strand = Plus / Plus
Query: 1 tccatgtagtgtttccagactgtagttgatttcaggcaactgatcctatggagcataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 tccatgtagtgtttccagactgtagttgatttcaggcaactgatcctatggagcat---- 276
Query: 61 ctcccaagataaggggaacaagcatccttgttcccctgtctagaactgagcaagaacact 120
| |||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 277 ---------------g-acaaccatcctcgttcccctgtctagaactgagcaagaacact 320
Query: 121 cctgtacaggcagaagatagtgtggttctgtttcaaaatgtataagactttgctctaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtacaggcagaagatagtgtggttctgtttcaaaatgtataagactttgctctaaaa 380
Query: 181 ttaattttccaaaaaaaa--ttatgcttctgttctacttgtatcaactttgatgaagcat 238
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaattttccaaaaaaaaaattatgcttctgttctacttgtatcaactttgatgaagcat 440
Query: 239 caa 241
|||
Sbjct: 441 caa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 646
Length adjustment: 9
Effective length of query: 235
Effective length of database: 637
Effective search space: 149695
Effective search space used: 149695
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
