Query= MSMg01no433_p06.b1 MSMg01no433_p06.b1 CHROMAT_FILE:
MSMg01no433_p06.b1 PHD_FILE: MSMg01no433_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:12 2005
(266 letters)
>mm_chr2_46534769_46535434
Length = 666
Score = 501 bits (259), Expect = e-146
Identities = 262/263 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatccaggctttggagcaggaagactgggcagaggaccaagcttcagagaagag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ggaattcatccaggctttggagcaggaagactgggcagaggaccaagcttcagagaagag 407
Query: 64 gtaagtaaccatagaagagcacaggctggagacagtgctcccgcagctggccttggggtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtaagtaaccatagaagagcacaggctggagacagtgctcccgcagctggccttggggtg 347
Query: 124 gtgggctaacaagagagcctctggagagacaagtgcatgtttgtgggagaagcattggct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gtgggctaacaagagagcctctggagagacaagtgcatgtttgtgggagaagcattggct 287
Query: 184 gggagaaacatgtggtcaaggtctcaggctctgcgatgggctagaaacagcgactgtcct 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 286 gggagaaacatgtggtcaaggtctcaggctctgcgatgggctagaaacagtgactgtcct 227
Query: 244 tgacagtgcatagctggatttag 266
|||||||||||||||||||||||
Sbjct: 226 tgacagtgcatagctggatttag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 666
Length adjustment: 9
Effective length of query: 257
Effective length of database: 657
Effective search space: 168849
Effective search space used: 168849
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_p06.g1 MSMg01no433_p06.g1 CHROMAT_FILE:
MSMg01no433_p06.g1 PHD_FILE: MSMg01no433_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:12 2005
(437 letters)
>mm_chr2_46369249_46370085
Length = 837
Score = 777 bits (402), Expect = 0.0
Identities = 427/438 (97%), Gaps = 6/438 (1%)
Strand = Plus / Plus
Query: 1 caggacagccagggcaatacagagaaaccctgtctcgaaaaaacaaaaaacaaaaaaaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 caggacagccagggcaatacagagaaaccctgtctcgaaaaaacaaaaaacaaaaacaca 264
Query: 61 aaaacaaaaaaagaaaagaaaagtaagaaagaaaaagaaaaaag-aaaagtaatataatg 119
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 265 aaaacaaaaaaagaaaaga-----aagaaagaaaaagaaaaaagaaaaagtaatataatg 319
Query: 120 ggaattgatgttacattaattatatgatgttcactgaatcatactgagcacaatgttttc 179
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 320 ggaattgatgttacattaattatacgatgttcactgaatcatactgagcacaatgtttcc 379
Query: 180 aaagatgcttagagaaaaatagagctcagctttgcagcttgcttgggcagaagaaccgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 380 aaagatgcttagagaaaaatagagctcagctttgcagcttgcttgggcagaagaaccaaa 439
Query: 240 ataagaagcttctagtcttaagagctctcagatattccacgtaatggagcgcaaacgtct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ataagaagcttctagtcttaagagctctcagatattccacgtaatggagcgcaaacgtct 499
Query: 300 ttgcaatcgtcatagtgcttaaggaaggcatctggtcctatttctgagatttggacctgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttgcaatcgtcatagtgcttaaggaaggcatctggtcctatttctgagatttggacctgt 559
Query: 360 gaaacttctcagtcccattgtaagccaggccctgccctttaatattgctagccactactt 419
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 560 gaaacttctcagtcccattgtaagccaggccctgccctttaatatttctagccactactt 619
Query: 420 ttgatagattttggaaat 437
||||||||||||||||||
Sbjct: 620 ttgatagattttggaaat 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
