Query= MSMg01no435_l04.b1 MSMg01no435_l04.b1 CHROMAT_FILE:
MSMg01no435_l04.b1 PHD_FILE: MSMg01no435_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:32 2005
(453 letters)
>mm_chr2_45524453_45525306
Length = 854
Score = 855 bits (442), Expect = 0.0
Identities = 448/450 (99%), Gaps = 1/450 (0%)
Strand = Plus / Minus
Query: 5 gaattcagatctgccactgacctagggcatgactaacagaaacaactatgaaaaaagagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gaattcagatctgccactgacctagggcatgactaacagaaacaactatgaaaaaagagc 595
Query: 65 atgtttagtgaggccagcaacattatacattcctggttcaggctttttaccagagtgctg 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atgttcagtgaggccagcaacattatacattcctggttcaggctttttaccagagtgctg 535
Query: 125 ggcccagtagagcttcttaagttgttgttgaaatgtagtatcagcaagagatgagttggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggcccagtagagcttcttaagttgttgttgaaatgtagtatcagcaagagatgagttggg 475
Query: 185 acattaagcaataatgtaaacacagtaaataattccttttcaggctctagaagggcaggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 acattaagcaataatgtaaacacagtaaataattccttttcaggctctagaagggcaggt 415
Query: 245 agagagaaaggagtatacagaggtacaacacaaggcatgaaag-aaaaaaaaaaaaagac 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 414 agagagaaaggagtatacagaggtacaacacaaggcatgaaagaaaaaaaaaaaaaagac 355
Query: 304 ctgatccaccttactggacaaaacaagatcctgaatgcctagcaaaggaaaagtctgagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ctgatccaccttactggacaaaacaagatcctgaatgcctagcaaaggaaaagtctgagt 295
Query: 364 tctaggatctgagacactataattgaacctgagatcttttcaatcagatctcttacagag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tctaggatctgagacactataattgaacctgagatcttttcaatcagatctcttacagag 235
Query: 424 tatgagaacaagccagatttttatctccaa 453
||||||||||||||||||||||||||||||
Sbjct: 234 tatgagaacaagccagatttttatctccaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_l04.g1 MSMg01no435_l04.g1 CHROMAT_FILE:
MSMg01no435_l04.g1 PHD_FILE: MSMg01no435_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:32 2005
(442 letters)
>mm_chr2_45474943_45475784
Length = 842
Score = 837 bits (433), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Plus
Query: 3 tttttttttttttttttctggatacactctgcctgtggactttcctatccattcttgttt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tttttttttttttttttctggatacactctgcctgtggactttcctatccattcttgttt 262
Query: 63 atctccagctgctggtctgccccatggcttccagacatgtcagtttctatgtttgaatca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atctccagctgctggtctgccccatggcttccagacatgtcagtttctatgtttgaatca 322
Query: 123 attacttaaagaattctttgatagacatgttatgcctaatttttaaacactttccccttt 182
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 323 attacttaaagaattctttgatagagatgttatgcctaatttttaaacactttccccttt 382
Query: 183 tgacttttgaacatttctaattcgaaggtcactgtttttattaattactgaaactcacct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgacttttgaacatttctaattcgaaggtcactgtttttattaattactgaaactcacct 442
Query: 243 ggatcatcttgaaactctaaactacccatattttaattctagctttgcttcaaactccct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggatcatcttgaaactctaaactacccatattttaattctagctttgcttcaaactccct 502
Query: 303 ttgtcatgtcttcttgatagatattcatacttcattgtcaccagttacttttggctctaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgtcatgtcttcttgatagatattcatacttcattgtcaccagttacttttggctctaa 562
Query: 363 aatttccttcactgtgtgtctccaagtggttaccacatttactccttttaccccttacta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatttccttcactgtgtgtctccaagtggttaccacatttactccttttaccccttacta 622
Query: 423 aatatatggncatctgctca 442
||||||||| ||||||||||
Sbjct: 623 aatatatggtcatctgctca 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
