GATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTTTATTTGCAGGTCAGCATGTAGAAGAATGCAAATTGATCCA
TTCTTATCTCCTTATACAAAGTTCAAGTACAAGTGGATCAAGGAACTCCA
CATAAAACCAGAGACACTGAAACTTAGAGAGGAGAAAGTAGGGAAAATCC
TTGAATACATGGGCACAGGGGGAAAATTCCTGAACAGAACACCAATGGCT
TATGCTCGAAGGCCAAAAATCAACAAATGGGACCTCATAAAATTGCAAAG
CTTCTGTAAGGCAAAGGACACTGTCAATACAACAAAAAGGCAACCAACAT
ATTGGGAAAAGATCTTTACCAATCCTACATCAGATAGGCTAATATCCAAG
TTATACAAAGAACTCAAGAAGTTAAACTTCAGAGAATCAAATAACCTTAT
TAAAAATGGGGTACAGAGCTAAACAAAGAATTTTCAACTGAGGAATATTG
AAATGCTGAGAAGCACCTGAAAAAAAGTTCAGCATCCTTAGTCATCAGGG
AAATGCAAATCAAAACAATCCTGAGATTCCACCTCACACCAGTCAGAATG
GCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGA
AAAAGGGACACTCTTCCATTGCTGGCGGTATTGCAAGCTGTGCACCCCAC
CCTAGAAATCACTTTGGTGATTTTTCACACATTTGGACATAGTACTACCT
G

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTAGACTTGTGCCTCCTGAGAAAG
GAGAAATGAAGGTGAGAAGCCCATGGGTACCCACACATGCATACACTAGA
TGGCCCTGCTGGGCTTTGGGCTTTGGGCTTTTGCTAGAAAGTCAACAGTG
ACTTTCTCCAGGGTTGCGATTTCAGAGATGGCATGATATACTGTAGTATT
TTGCCATATCACCCAGATTATCAGAGTAGAGCATAGGAAGCCACAGGGTG
AAATGACAGTGACAGAGATGAATCTTTGCAGCTTTGTCAGTGAAAAGAAG
TCAGTGTATGTACGATGCACTTCATTTTTGTAAGAGGCAAAGTCCTGTCA
ACCAGGAGGATGCCAGCTGAGGGGAATGAGCAGTCAAAAGTTTATCTACA
TATTTTTCTGCATATTTTGAGATGTTTCTACATTTCCTATTCTGTCTATT
CTGCTAACTGGCAGAAAGATCACAACAGCACATGCACGCTCTTTTATTGA
GTGCTGAGCAGTCGTTATTTCCACAGAATTACTCCTCATTCAATGTTCTA
CATAAGAATGCTACATTCACCCCAAGACAATGAAGAGCCATGAGTGATGA
GGCTGCTTTAAATTTTTCAACAACTACTTGGCAGATTTCACATTCATCTT
TCAATACATTCCCTTTAAATGATAATGTATTGATCAATAACAAAACCTAT

Query= MSMg01no436_n01.g1 MSMg01no436_n01.g1 CHROMAT_FILE:
MSMg01no436_n01.g1 PHD_FILE: MSMg01no436_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:59 2005
         (587 letters)



>mm_chr2_133696857_133697843
          Length = 987

 Score = 1067 bits (552), Expect = 0.0
 Identities = 579/588 (98%), Gaps = 2/588 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttagacttgtgcctcctgagaaaggagaaatgaaggtgagaagcccatgggtacccacac 60
           ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 787 ttagacttgtgcctcctaagaaaggagaaatggaggtgagaagcccgtgggtacccacac 728

                                                                       
Query: 61  atgcatacactagatggccctgctgggctttgggctttgggcttttgctagaaagtcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atgcatacactagatggccctgctgggctttgggctttgggcttttgctagaaagtcaac 668

                                                                       
Query: 121 agtgactttctccagggttgcgatttcagagatggcatgatatactgtagtattttgcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 agtgactttctccagggttgcgatttcagagatggcatgatatactgtagtattttgcca 608

                                                                       
Query: 181 tatcacccagattatcagagtagagcataggaagccacagggtgaaatgacagtgacaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tatcacccagattatcagagtagagcataggaagccacagggtgaaatgacagtgacaga 548

                                                                       
Query: 241 gatgaatctttgcagctttgtcagtgaaaagaagtcagtgtatgtacgatgcacttcatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gatgaatctttgcagctttgtcagtgaaaagaagtcagtgtatgtacgatgcacttcatt 488

                                                                       
Query: 301 tttgtaagaggcaaagtcctgtcaaccaggaggatgccagctgaggggaatgagcagtca 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 487 tttgtaagaggcaaagtcctgtcaaccaggaggatgccagctgaagggaatgagcagtca 428

                                                                       
Query: 361 aaagtttatctacatatttttctgcatattttgagatgtttctacatttcctattctgtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aaagtttatctacatatttttctgcatattttgagatgtttctacatttcctattctgtc 368

                                                                       
Query: 421 tattctgctaactggcagaaagatcacaacagcacatgcac-gctcttttattgagtgct 479
           ||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||
Sbjct: 367 tattctgctaactggcagaaagatcacaacagcacatgcacag-tcttttactgagtgct 309

                                                                       
Query: 480 gagcagtcgttatttccacagaattactcctcattcaatgttctacataagaatgctaca 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gagcagtcgttatttccacagaattactcctcattcaatgttctacataagaatgctaca 249

                                                           
Query: 540 ttcaccccaagacaatgaagagccatgagtgatgaggctgctttaaat 587
           |||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 248 ttcacctcaagacaatgaagagccatgagtgaggaggctgctttaaat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)