Query= MSMg01no437_o17.b1 MSMg01no437_o17.b1 CHROMAT_FILE:
MSMg01no437_o17.b1 PHD_FILE: MSMg01no437_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:29 2005
(584 letters)
>mm_chr2_178852892_178853875
Length = 984
Score = 866 bits (448), Expect = 0.0
Identities = 468/476 (98%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 5 ggaattcagtctaggtattcctgcaacacttggatgcagatctaggactggacacttctg 64
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ggaattcagtctaggtaatcatgcaacacttggatgcagatctaggactggacacttctg 414
Query: 65 cttagccttgggtgtttgaggtgcacacgttgccgaatcaagggctcatgcgtttctatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cttagccttgggtgtttgaggtgcacacgttgccgaatcaagggctcatgcgtttctatt 354
Query: 125 tctgcttgcgagactgagtaacaggggccagtgggcaggacctgagaggaggctccctct 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tctgcttgagagactgagtaacaggggccagtgggcaggacctgagaggaggctccctct 294
Query: 185 gctgcctcctcctgccttgtcagcctcctcaatactggggttagcaccaggtgcttgcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gctgcctcctcctgccttgtcagcctcctcaatactggggttagcaccaggtgcttgcta 234
Query: 245 ttttggaagatatattccaacactttttttttgtgctctctctcttccaacccttttgag 304
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 233 ttttggaagatatattccaacac---ttttttgtgctctctcacttccaacccttttgag 177
Query: 305 tagataccaaggttttcagaacctgagggtaagaacgttgttaattgtatgagaaactcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tagataccaaggttttcagaacctgagggtaagaacgttgttaattgtatgagaaactcc 117
Query: 365 caggtaattttctctttgaaaaataatgacagaataaggaaaaatagaaactccgtttac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 116 caggtaattttctctttgaaaaataatgacagaataaggaaaaatagaaactctgtttac 57
Query: 425 tccagtgcttgtgaggtctggctctcctccctgtggatcaaggtccttttgtgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 tccagtgcttgtgaggtctggctctcctccctgtggatcaaggtccttttgtgtta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no437_o17.g1 MSMg01no437_o17.g1 CHROMAT_FILE:
MSMg01no437_o17.g1 PHD_FILE: MSMg01no437_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:03:29 2005
(543 letters)
>mm_chr2_178667528_178668470
Length = 943
Score = 907 bits (469), Expect = 0.0
Identities = 522/540 (96%)
Strand = Plus / Plus
Query: 1 atccacacagtgcagggacaaggtatgctctagaaacaattccccagactacaatggtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccacacagtgcagggacaaggtatgctctagaaacaattccccagactacaatggtta 260
Query: 61 cagaggttctcagctctggtcttcttggaggaaagaattcaagtgtgagatgggaggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaggttctcagctctggtcttcttggaggaaagaattcaagtgtgagatgggaggagt 320
Query: 121 ctgcatggaaatttactgagcaaagccaggcaaagcatcatccaacacaaagagaaggag 180
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgtggaaatttactgagcaaaaccaggcaaagcatcatccaacacaaagagaaggag 380
Query: 181 cagcccagtaggtcactaaacatcactgcagattataaagtagtttttatgaatttataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcccagtaggtcactaaacatcactgcagattataaagtagtttttatgaatttataa 440
Query: 241 ggtggtggcttcttggggaaaataagacccttttctctctggtatcacagtggttgggtt 300
||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 441 ggtggtggcatcttgggggaaataagacccttttctctctgatatcacagtggttggatt 500
Query: 301 ttgttcccatgttcctctagaaaagcccacaaaagtcagaagtgaggtgtgtgtcgaagc 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgttcccatgttcctctagaagagcccacaaaagtcagaagtgaggtgtgtgtcgaagc 560
Query: 361 cacaatgcatctcacagtgtaatgctgtcaggactttgaaaacagagaaccttggaaaac 420
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgatgcatctcatagtgtaatgctgtcaggactttgaaaacagagaaccttggaaaac 620
Query: 421 acacatatgggagaatgcctcctgcccctgtctctgtagagagaacagnctagcacataa 480
||||||||||||||||||| | ||||||||||||||||||| |||||| |||||||||||
Sbjct: 621 acacatatgggagaatgccgcttgcccctgtctctgtagagggaacagcctagcacataa 680
Query: 481 cctcagccagtgacctccccaatactcagggtcaaacctccaggcattcaagaaccacat 540
|||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||
Sbjct: 681 cctcagccagtgacctccccaatactcagggtcaaatctccaggcatccaggaaccacat 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
