Query= MSMg01no439_h02.b1 MSMg01no439_h02.b1 CHROMAT_FILE:
MSMg01no439_h02.b1 PHD_FILE: MSMg01no439_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:34 2005
(402 letters)
>mm_chr2_165038349_165039153
Length = 805
Score = 683 bits (353), Expect = 0.0
Identities = 387/399 (96%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgtctgttgc-cctactgagccctctgggaagctttaagagtgccttctgtat 62
||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggctggggcacctactgagccctctgggaagctttaagagtgccttctgtat 263
Query: 63 acacgagtgccttctgtatacactttgtaatactgggcctctccatccatcagagccacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acacgagtgccttctgtatacactttgtaatactgggcctctccatccatcagagccacc 323
Query: 123 ggcccctcttggg--gtagctacctggtttgtgaaaatgcaagtgtagacacaaagccaa 180
||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggctcctcttggggtgtggctacctggtttgtgaaaatgcaagtgtagacacaaagccaa 383
Query: 181 cctccagccagctcccattggctgtttcacatgtcatctgtttccactggtggatgcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctccagccagctcccattggctgtttcacatgtcatctgtttccactggtggatgcctc 443
Query: 241 tgctggagtggctgctaagagtcttggatggtacacttggttgtgtgacttgtcaaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgctggagtggctgctaagagtcttggatggtacacttggttgtgtgacttgtcaaagcc 503
Query: 301 acaggatcggaagtgaaaactggaagctatgctttctatctctctgccacctctgtgtag 360
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acaggatcggatgcgaaaactggaagctatgctttctatctctctgccacctctgtgtag 563
Query: 361 tgagtcttgtgagaggagcatctcaggagaaaaggaggg 399
|| ||||||||||||||||||||||||||| ||||||||
Sbjct: 564 tgcgtcttgtgagaggagcatctcaggagagaaggaggg 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 805
Length adjustment: 9
Effective length of query: 393
Effective length of database: 796
Effective search space: 312828
Effective search space used: 312828
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_h02.g1 MSMg01no439_h02.g1 CHROMAT_FILE:
MSMg01no439_h02.g1 PHD_FILE: MSMg01no439_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:34 2005
(241 letters)
>mm_chr2_165210868_165211508
Length = 641
Score = 385 bits (199), Expect = e-111
Identities = 237/265 (89%), Gaps = 24/265 (9%)
Strand = Plus / Minus
Query: 1 tcttgctgtacttctctgcaagcggtctgcagaaggctcttggagttctccggtgcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tcttgctgtacttctctgcaagcggtctgcagaaggctcttggagttctccggtgcagaa 329
Query: 61 cagaaataatgtccccacctctgttcagtgtgcggccacctcactgttctctgccgatgt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 328 cagaaataatgtccccacctctgttcagtgtgcagccacctcactgttctctgccgacgc 269
Query: 121 tgctaagccttccacaagctagaaagaaaataagccaggtgtggtgactgaggcctacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgctaagccttccacaagctagaaagaaaataagccaggtgtggtgactgaggcctacag 209
Query: 181 ctccaggactcagggag------------------------ttgaggccaacctgggcta 216
||||||||||||||||| |||||||||||||||||||
Sbjct: 208 ctccaggactcagggagctaaggcaggagaattgccatgagttgaggccaacctgggcta 149
Query: 217 cattgtgaagctgtctcaaaagtgg 241
||||||||| |||||||||||||||
Sbjct: 148 cattgtgaaactgtctcaaaagtgg 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
