Query= MSMg01no442_g21.b1 MSMg01no442_g21.b1 CHROMAT_FILE:
MSMg01no442_g21.b1 PHD_FILE: MSMg01no442_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:35 2005
(394 letters)
>mm_chr2_11416481_11417274
Length = 794
Score = 723 bits (374), Expect = 0.0
Identities = 386/390 (98%)
Strand = Plus / Minus
Query: 5 gaattctcttgtctatacagcttcacacttgtcacccaggaccccatggtcaaggagaac 64
||||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 594 gaattctcttgtctagatagcttcacactcgtcacctaggaccccatggtcaaggagaac 535
Query: 65 acatagctctgcttctacacagaccctagcctgcagatctaaagcgaaagatccacgctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acatagctctgcttctacacagaccctagcctgcagatctaaagcgaaagatccacgctg 475
Query: 125 ggtctccccctatgcttagccttcccatggacctctatctaaatctgacatctgtctaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggtctccccctatgcttagccttcccatggacctctatctaaatctgacatctgtctaga 415
Query: 185 ttgctggtacgactctcctctcttttcctgcaggctgtgcagcctgtctgggacaggaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttgctggtacgactctcctctcttttcctgcaggctgtgcagcctgtctgggacaggaga 355
Query: 245 aggccagctgagctcttagctggcaggcagcctctttggcttgtgagctcacttgtcacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aggccagctgagctcttagctggcaggcagcctctttggcttgtgagctcacttgtcacc 295
Query: 305 aggatgcaggagtcgcccgagagtctcaggggcaaagacacagccaaggaaatgttggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aggatgcaggagtcgcccgagagtctcaggggcaaagacacagccaaggaaatgttggaa 235
Query: 365 cgttagtttgtctagcaggattcctttggc 394
||||||||||||||||||||||||||||||
Sbjct: 234 cgttagtttgtctagcaggattcctttggc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_g21.g1 MSMg01no442_g21.g1 CHROMAT_FILE:
MSMg01no442_g21.g1 PHD_FILE: MSMg01no442_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:35 2005
(383 letters)
>mm_chr2_11328867_11329650
Length = 784
Score = 634 bits (328), Expect = 0.0
Identities = 373/394 (94%), Gaps = 12/394 (3%)
Strand = Plus / Plus
Query: 1 caagcccagggttggctcaaggactacctagggcattgttgaaaggccaggaagcaaagt 60
|||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 192 caagcccaggattggctcaaggactacctagggcattggtgaa-ggccaggaagcaaagt 250
Query: 61 tcaatttgcttaggtatttggtaagtcattgcttggaggcacctataacaaaacaatact 120
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 251 tcaatttgcttaggtatttggcaagtcgttgcttggaggcacctataacaaaacaatact 310
Query: 121 gaaaggaagcacacagatccattcgcaaggacaaaattggagcatacgtgctatggactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 311 gaaaggaagcacacagatccattcgcaaggacaaaattggagcatacgtgctatggattg 370
Query: 181 ccacagttccaggacact----------gaaactctttgcctcaggactgcatccaggct 230
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 371 ccacagttccaggacactaaatttccgtgaaactctttgcctcaggactgcatccaggct 430
Query: 231 tttggcctgtcatgcatgtcactactggaatggatgtagcacacaccagaatatgagcac 290
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 431 tttggcctgtcatgcatgtcactactggaatggatgtagcacacaccagaatatgagctc 490
Query: 291 caacaaaacaataaaaaaac-aaaactttgtggtagcacatatccctatgtagtagtcca 349
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 caacaaaacaataaaaaaaccaaaactttgtggtagcacatatccctatgtggtagtcca 550
Query: 350 tatccctatgtggtagtccatatccctatgtggt 383
||| ||||||||||||||||||||||| ||||||
Sbjct: 551 tattcctatgtggtagtccatatccctctgtggt 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 784
Length adjustment: 9
Effective length of query: 374
Effective length of database: 775
Effective search space: 289850
Effective search space used: 289850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
