Query= MSMg01no442_l20.b1 MSMg01no442_l20.b1 CHROMAT_FILE:
MSMg01no442_l20.b1 PHD_FILE: MSMg01no442_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:02 2005
(380 letters)
>mm_chr2_169396483_169397262
Length = 780
Score = 669 bits (346), Expect = 0.0
Identities = 365/376 (97%), Gaps = 9/376 (2%)
Strand = Plus / Plus
Query: 1 cttaaacggtctgctgtccggtggtgcttggggtcagaatccatctcttatcataaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaacggtctgctgtccggtggtgcttggggtcagaatccatctcttatcataaataa 260
Query: 61 aagcatatgaacacccctgaccatatcccttgtacatgtctcttagtttattaacaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagcatatgaacacccctgaccatatcccttgtacatgtctcttagtttattaacaagtt 320
Query: 121 tctttgtctatttttaattatttgagaattccacacatctttttagcaaagcaaggcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctttgtctatttttaattatttgagaattccacacatctttttagcaaagcaaggcata 380
Query: 181 gtattaaagacttggaaacagtgtgaaatcttcttgttaatttgtaccaagatttcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattaaagacttggaaacagtgtgaaatcttcttgttaatttgtaccaagatttcaaga 440
Query: 241 acactgaagctaaacacatatgtgacctggacactgttctctctgtctctctgtctctct 300
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 441 acactgaagctaaacacagaggtgacctggacactgttctctctgtctctctgtctct-- 498
Query: 301 gtctctgtctcttctctctctctctctctctctctctctctctctctctctctctctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ------gtctcttctctctctctctctctctctctctctctctctctctctctctctctc 552
Query: 361 tctctctctctctctt 376
||||||||||| ||||
Sbjct: 553 tctctctctct-tctt 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_l20.g1 MSMg01no442_l20.g1 CHROMAT_FILE:
MSMg01no442_l20.g1 PHD_FILE: MSMg01no442_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:02 2005
(374 letters)
>mm_chr2_169512332_169513106
Length = 775
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%), Gaps = 1/375 (0%)
Strand = Plus / Minus
Query: 1 tctatgcctccttgtctgttctcaaaaacccagttcaaactcaatccagcaacgagaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctatgcctccttgtctgttctcaaaaacccagttcaaactcaatccagcaacgagaaat 516
Query: 61 aatctctccccagggtctgacaccccctaaatgcttggaggatgaactctgtgcttgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aatctctccccagggtctgacaccccctaaatgcttggaggatgaactctgtgcttgctt 456
Query: 121 caccacaaaattattcacaggctcacaggacacttgctggcctctggaatcctatgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caccacaaaattattcacaggctcacaggacacttgctggcctctggaatcctatgtcac 396
Query: 181 aactgacaggggcctggcagatgtctctaatgatattaccaaatggttctccccactctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aactgacaggggcctggcagatgtctctaatgatattaccaaatggttctccccactctt 336
Query: 241 ggcatcaggtattagca-tttttttttaaccagacagtccctcagatgtgatgctattac 299
||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggcatcaggcaagagcattttttttttaaccagacagtccctcagatgtgatgctattac 276
Query: 300 ccaactttcaaagctcctttttgacctctggtggggagtgaattgggcacatacgctcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccaactttcaaagctcctttttgacctctggtggggagtgaattgggcacatacgctcca 216
Query: 360 aagggctgcggggac 374
|||||||||||||||
Sbjct: 215 aagggctgcggggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 775
Length adjustment: 9
Effective length of query: 365
Effective length of database: 766
Effective search space: 279590
Effective search space used: 279590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
