Query= MSMg01no444_a12.b1 MSMg01no444_a12.b1 CHROMAT_FILE:
MSMg01no444_a12.b1 PHD_FILE: MSMg01no444_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:48 2005
(355 letters)
>mm_chr2_148476196_148476955
Length = 760
Score = 632 bits (327), Expect = 0.0
Identities = 346/355 (97%), Gaps = 5/355 (1%)
Strand = Plus / Minus
Query: 5 gaattctcattaatcccgaaagaaagcttgtatgcaaaggcaatctggtcacatctgaga 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaattctcattaaacaagaaagaaagcttgtatgcaaaggcaatctggtcacatctgaga 500
Query: 65 caccct-----cccccccccccaacacgtactcccctcccaggaatggttggtgggcata 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cacccttcccccccccccccccaacacgtactcccctcccaggaatggttggtgggcata 440
Query: 120 gcaagccatctcctaggcagagactggaaaaagaatgcaggactagtgctaatgttattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcaagccatctcctaggcagagactggaaaaagaatgcaggactagtgctaatgttattt 380
Query: 180 aaccagagattgacagaaaacaaaagaggactctggttccctgagggggaggacaaatga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaccagagattgacagaaaacaaaagaggactctggttccctgagggggaggacaaatga 320
Query: 240 gatgggagactgaattattcatttttatttacctctccggaacaggctgaaaaagcttat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gatgggagactgaattattcatttttatttacctctccggaacaggctgaaaaagcttat 260
Query: 300 ttagtaaaggaatgaatatgagagaaacgggacccagctggctctggagagagga 354
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttagtaaaggaatgaaaatgagagaaacgggacccagctggctctggagagagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 760
Length adjustment: 9
Effective length of query: 346
Effective length of database: 751
Effective search space: 259846
Effective search space used: 259846
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_a12.g1 MSMg01no444_a12.g1 CHROMAT_FILE:
MSMg01no444_a12.g1 PHD_FILE: MSMg01no444_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:49 2005
(244 letters)
>mm_chr2_148278919_148279562
Length = 644
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%)
Strand = Plus / Plus
Query: 1 gaattcttctcttcttgccttgcccatgctgtgacttccggggagtaacttgactgccct 60
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gaattcttctcttcttgacttgcccatgctgtgacttctggggagtaacttgactgccct 260
Query: 61 atactcttagatttatttctgtgacagaaccgtgagagcagccaacctcatctacacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atactcttagatttatttctgtgacagaaccgtgagagcagccaacctcatctacacatc 320
Query: 121 tgaaagaagtcagagctgggtaggcaggacagccacacagcgtgaattccactctgtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaagaagtcagagctgggtaggcaggacagccacacagcgtgaattccactctgtcct 380
Query: 181 tattgcgtggatgaatgaagaacacatgtgcttgatgcctcacgaagaacaagttgacta 240
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 381 tattgcgtggatgaatgaagaacacatgcgcttgatgccccacgaagaacaagttgacta 440
Query: 241 aact 244
||||
Sbjct: 441 aact 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
