ATTCTTCTCACTCCTACTACGATCCTTAATATCTTCTCGCAATTGCGGTA
ATCTTTCTTCGTGCTCTCCCCGACCGTGTCATTTTCATCATCTTACATCT
CTCAGGTACACCGACCTAATTATGACACTACAATACCCTAACGCCTTGTC
ACAGATAACCCTGCTATTATTTTATCCTCCTATCACCGCATTAGCCCCTA
TACCTCTCCAATCATACCTACTCTCTCACGTTAGCTCTCCCACCTCCATC
CCCCTATCTTTCTCTTATTTTTTTTCACCCCCCTTGCCACCATATATCCC
TCCTCTTATTCTTCCCACTTGTTTACCCTCTTTCTCTCTTCTTCCTCCTT
CCCCTTCCCCCCCACATCCTATTTCGTATTCACCCTTTTTTTTTTCACCA
CTTTTTTTTTTTTTTTCTTGCTTCCCCTTCATGCCCTATTATTAACCTCC
TTTTTCATTATTTCATTTACCCCCCCCCCCCCCCCCCCCACCCTTTCCTT
TCACCCATATTACACTTTCCCCCCCACCTTCCCTTAACTATTATTCATCC
AACCTATATTTCCAATACCCATACCCAGTCTCACCCCACTTTCCACATTT
GTTTAACACCCTTTATATCTTTCTCCCACCATATACTATCTCCTCCTTTT
TTCTGTTTCCCTCCTCCCTTCCCCCCCCTCTTTCTTTTTTCATTTTATTT
CCCCCCCCCTTATAATACCTTTTTATCTCCCAAACACAAATTTATTAAAT
GTCCTTTTTCTATTTTATCCCACCCCCCTATTTATCCCCCTCCCCCCTCT
CCCCCCCATTATAATTTTTTCCCCCTTTTTTTTTCCACTCCGGCACCGCC
CCCACTCTGAGGTCCAACCTTTTATTCCCCGTTTCCTCCACTGTCCACCT
CCACCCATTTCTTTTCACCCCCACCTATTTATTCTCTATTCTCCTCCCGC
ACG

GCAAAANANACCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGTACTTTAAAGT
TATTATTCTGAATTGGTTTTCAACAATAATAGCTACAAAATTTGCTTTGT
TTCTCACTTGAAGGCCCATTTTGAACACCTCTTGACTGCTGTGGTGGCCA
GATGGTGCAAAAGTAAAGTGAGACACCAAGTCTTGGTGCTGGGTCTCCTC
ACATCTTCTGCATGCTGGCGTGTGTGCAGTTGGCATGGCCAGATAGAGAC
AGAGCTGGCACCCATTGCCAGTGTTTTAATACTCTGCATCACATTTCAGC
AATGGGAGACAAACAGAAGAAAGCAGCCAGTGGGATTTGTTAAATGTCAG
CATTTGGAAAGAGCAACACACAAATTCCAGTGAGACTTAAGTTTTCTGTG
TAGCACTAGATAGATGCACCAGAAACAGCTTTATCTCTTTAATTTTAAAT
GTTAATTAATTTGGTTTTTTATGTTTTTAATTTGCTGGAGGCCAGAAAAT
TTCATGCTCAGAATACCAATATGCACTCCTGGATCCAGAAAGATCCTTTA
ACTAGATGGAATAACACCGACTTTCAGCTCTCATTCCATCTAGTGGTGAT
GTTTGAATTGCGCACGNCCCCCTAAGTTTTGTAATTAACACCCGCTCTAT
TCTCCTACCCGTCTATAC

Query= MSMg01no444_b05.g1 MSMg01no444_b05.g1 CHROMAT_FILE:
MSMg01no444_b05.g1 PHD_FILE: MSMg01no444_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:52 2005
         (471 letters)



>mm_chr2_16716641_16717511
          Length = 871

 Score =  847 bits (438), Expect = 0.0
 Identities = 462/470 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagtactttaaagttattattctgaattggttttcaacaataatagctacaaaatttgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 670 tagtactttaaagttattattctgaattggttttcaacaataatagctacaaaatctgct 611

                                                                       
Query: 61  ttgtttctcacttgaaggcccattttgaacacctcttgactgctgtggtggccagatggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttgtttctcacttgaaggcccattttgaacacctcttgactgctgtggtggccagatggt 551

                                                                       
Query: 121 gcaaaagtaaagtgagacaccaagtcttggtgctgggtctcctcacatcttctgcatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gcaaaagtaaagtgagacaccaagtcttggtgctgggtctcctcacatcttctgcatgct 491

                                                                       
Query: 181 ggcgtgtgtgcagttggcatggccagatagagacagagctggcacccattgccagtgttt 240
           ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 490 ggcatatgtgcagttggcatggccagatagagacagagctggcacccattgccactgttt 431

                                                                       
Query: 241 taatactctgcatcacatttcagcaatgggagacaaacagaagaaagcagccagtgggat 300
            || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 430 gaagactctgcatcacatttcagcaatgggagacaaacagaataaagcagccagtgggat 371

                                                                       
Query: 301 ttgttaaatgtcagcatttggaaagagcaacacacaaattccagtgagacttaagttttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgttaaatgtcagcatttggaaagagcaacacacaaattccagtgagacttaagttttc 311

                                                                       
Query: 361 tgtgtagcactagatagatgcaccagaaacagctttatctctttaattttaaatgttaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgtgtagcactagatagatgcaccagaaacagctttatctctttaattttaaatgttaat 251

                                                             
Query: 421 taatttggttttttatgtttttaatttgctggaggccagaaaatttcatg 470
           ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 taatttgtttttttatgtttttaatttgctggaggccagaaaatttcatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space:   396921
Effective search space used:   396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)