Query= MSMg01no444_f08.b1 MSMg01no444_f08.b1 CHROMAT_FILE:
MSMg01no444_f08.b1 PHD_FILE: MSMg01no444_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:12 2005
(232 letters)
>mm_chr2_130440431_130441062
Length = 632
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Minus
Query: 1 caccttctcacctgcctgattggcttggcattttctgaatactttccagttgagttcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caccttctcacctgcctgattggcttggcattttctgaatactttccagttgagttcata 373
Query: 61 aatgttgctctgagcccaggatttgtcaagttagctcaagagagaagtaagtttgaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aatgttgctctgagcccaggatttgtcaagttagctcaagagagaagtaagtttgaactc 313
Query: 121 actaaggaactgtttactcttgatggtacagttgccattgaatgtccagattacaagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 actaaggaactgtttactcttgatggtacagttgccattgaatgtccagattacaagggc 253
Query: 181 taccgtcttaattctcaccttcaacaagaaacatctgcaaatctgtggaatc 232
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaccgtcttaattctcaccttcaacaagaaacatctgcaaatctgtggaatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_f08.g1 MSMg01no444_f08.g1 CHROMAT_FILE:
MSMg01no444_f08.g1 PHD_FILE: MSMg01no444_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:12 2005
(451 letters)
>mm_chr2_130276531_130277384
Length = 854
Score = 820 bits (424), Expect = 0.0
Identities = 446/454 (98%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 1 aaaagcagccacttgggaacgcacatctcctgtgtttactttcagtaattcttaaaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagcagccacttgggaacgcacatctcctgtgtttactttcagtaattcttaaaaatt 260
Query: 61 gccacgggggggggg--ttaagcccctaatatttcctaaaaataacaactacagaggcag 118
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccacggggggggggggttgagcccctaatatttcctaaaaataacaactacagaggcag 320
Query: 119 agatgatcctgtctattagagggttttgttgttgatagtgatgatatttgtaggacaagc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgatcctgtctattagagggttttgttgttgatagtgatgatatttgtaggacaagc 380
Query: 179 aaaaaa-tgttccaaaccctcttggacagagtgtgatgtcggccgaagcccttggctagg 237
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaaatgttccaaaccctcttggacagagtgtgatgtcggccgaagcccttggctagg 440
Query: 238 ataggttatttctgttgaaaaccagcctcatgtccccggctatggcaccacttgttacct 297
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagggaatttctgttgaaaaccagcctcatgtccccggctatggcaccacttgttacct 500
Query: 298 gctaactcttgaagcagccagagaaccaaaagatggtggatgaggaaagactgggacagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctaactcttgaagcagccagagaaccaaaagatggtggatgaggaaagactgggacagg 560
Query: 358 atgaacatctttctgtctggatactcctttcgaaaatgtagatcagacgctgtcatttgt 417
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 atgaacatctttctgtctggatactcctttcgaaaacgtagatcagacgctgtcatttgt 620
Query: 418 gtgcttaaaaactccctcactttccttcctctgt 451
||||||||||||||| ||||||||||||||||||
Sbjct: 621 gtgcttaaaaactccttcactttccttcctctgt 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 854
Length adjustment: 10
Effective length of query: 441
Effective length of database: 844
Effective search space: 372204
Effective search space used: 372204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
