Query= MSMg01no445_p03.b1 MSMg01no445_p03.b1 CHROMAT_FILE:
MSMg01no445_p03.b1 PHD_FILE: MSMg01no445_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:20 2005
(437 letters)
>mm_chr2_31684836_31685672
Length = 837
Score = 804 bits (416), Expect = 0.0
Identities = 431/436 (98%)
Strand = Plus / Plus
Query: 1 ggtacccaactccatgggcctaccactcacatgtaccactgtctcctgactcagaccctc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtacccaaccccatgggcctaccactcacatgtaccactgtctcctgactcagaccctc 260
Query: 61 ttacaacagatgggtcagcaatacaaaatagcctttgtccagagcaagcctggccactcc 120
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 261 ttacaacagatgggtcagcaatacaaagtagccttcgtccagagcaagcctggccactcc 320
Query: 121 ccgaactgagccctctctgtccaccatcaccagatcgctagactaagatcagggcctctc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgaactgagccctctctgtccaccatcaccagatcgctagactaagatcagggcctctc 380
Query: 181 cagtgaccctcaaccttgacacaagccagctcccttgtccttctgccctctcagctgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtgaccctcaaccttgacacaagccagctcccttgtccttctgccctctcagctgaga 440
Query: 241 gcttaaaattctgcctcagtcccaaatggctccctgtggctgatgctctagcaattaatt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttaaaactctgcctcagtcccaaatggctccctgtggctgatgctctagcaattaatt 500
Query: 301 gttcagtagcaattaattgcattgacttgcctcagaaggcctggacgtcccctggccagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttcagtagcaattaattgcattgacttgcctcagaaggcctggacgtcccctggccagg 560
Query: 361 ctggctgggtagcagaggcaaacctcttgccctctctaggctaccctgccagcctttggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggctgggtagcagaggcaaacctcttgccctctctaggctaccctgccagcctttggg 620
Query: 421 aatagaaggggcatgg 436
||||||||||||||||
Sbjct: 621 aatagaaggggcatgg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_p03.g1 MSMg01no445_p03.g1 CHROMAT_FILE:
MSMg01no445_p03.g1 PHD_FILE: MSMg01no445_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:20 2005
(464 letters)
>mm_chr2_31837686_31838548
Length = 863
Score = 866 bits (448), Expect = 0.0
Identities = 460/464 (99%), Gaps = 1/464 (0%)
Strand = Plus / Minus
Query: 1 ttgtaaaaatgtaagatccatttcaagctaaataactaaataactcacattaagtgtgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttgtaaaaatgtaagatccatttcaagctaaataactaaataactcacattaagtgtgag 604
Query: 61 actggctcccacactctcctgagtagggacagaggatctcacatggctagaatggctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 actggctcccacactctcctgagtagggacagaggatctcacatggctagaatggctgca 544
Query: 121 gtagagtccagagaataagcaaagcagttgttacctctgacaggatgatctgactcataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gtagagtccagagaataagcaaagcagttgttacctctgacaggatgatctgactcataa 484
Query: 181 aatggaggacatggaatgacctttttttcctgcaaagtctgaaagagatttgagaaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aatggaggacatggaatgacctttttttcctgcaaagtctgaaagagatttgagaaatgt 424
Query: 241 caaaggaaacaataatgcttcagccagcaaaacaatccaatccaatcagagcccctagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 caaaggaaacaataatgcttcagccagcaaaacaatccaatccaatcagagcccctagaa 364
Query: 301 acaggtgctccatcctcccgcctccaccccaagcccccccgagagaagaacagcatcatt 360
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 363 acaggtgctccatcctcccgcctccaccccaag-ccccccaagagaagaacagcatcatt 305
Query: 361 tcccagcagcctacccagggaaacgcccagaccccttcagatgcaactgacgagaaggct 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 304 tcccagcagcctacccagggaaatgcccagaccccttcagatgcaactgacgagaaggct 245
Query: 421 cagtgcagtagcactcacagtgccacagctagtagtgctgatgc 464
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 244 cagtgcagcagcactcacagtgccacagctagtagtgctgatgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 863
Length adjustment: 10
Effective length of query: 454
Effective length of database: 853
Effective search space: 387262
Effective search space used: 387262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
