Query= MSMg01no446_i09.b1 MSMg01no446_i09.b1 CHROMAT_FILE:
MSMg01no446_i09.b1 PHD_FILE: MSMg01no446_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:04 2005
(195 letters)
>mm_chr2_70967551_70968145
Length = 595
Score = 323 bits (167), Expect = 4e-93
Identities = 185/195 (94%), Gaps = 8/195 (4%)
Strand = Plus / Minus
Query: 1 tctgtggtgagggaggcactgacctgttggatgtagagtatgagagctgtcagtccaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tctgtggtgagggaggcactgacctgttggatgtagagtatgagagctgtcagtccaacc 332
Query: 61 cagctgtgcaggctgtacatgtgggggactttttggacattgtggtactcaaacactgcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 331 cagctgtgcaggctgtacatgtgggggactttttggacattgtggtactcaaacacagcc 272
Query: 121 accactttt----atgatggcgaggatggcagccacagcgtttaatccggcatggatgga 176
||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 accac----ggagatgatggcgaggatggcagccacagcgtttaacccggcatggatgga 216
Query: 177 tttcatcaagagctt 191
|||||||||||||||
Sbjct: 215 tttcatcaagagctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no446_i09.g1 MSMg01no446_i09.g1 CHROMAT_FILE:
MSMg01no446_i09.g1 PHD_FILE: MSMg01no446_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:04 2005
(375 letters)
>mm_chr2_70793243_70794017
Length = 775
Score = 648 bits (335), Expect = 0.0
Identities = 365/375 (97%)
Strand = Plus / Plus
Query: 1 gttgggagccgctcttgccccgatcttccctgaccttgtgtttccctttgagacactgga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gttgggagccgctcttgccccgatcttccctgaccttgcgtttccctttgagacactgga 260
Query: 61 gcagtacttagctgatctgtggccatgcctttctctctcgagggcccttgcttctgctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagtacttagctgatctgtggccatgcctttctctctcgagggcccttgcttctgctgg 320
Query: 121 tcaccatctctagtagcgggctccgtaccactccgctaatctggcatgcgtcttcacctg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaccatctctagtagcgggctctgtaccactccgctaatctggcatgcgtcttcacctg 380
Query: 181 gatttttacctatgccgtgtgtgagctctcccttggtagaggtgaacccttgtgaatagg 240
|||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 381 gatttttacctacgccgtgtgtgaggtctcccttggtagaggtgaccccttgtgaatagg 440
Query: 241 tatttattttccatctctattgcagatcaccctttagaaagatgacgcccactaccgaca 300
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tatttatttgccatctctattgcagatcaccctttagaaaggtgacgcccactaccgaca 500
Query: 301 gagccgagccctctgatttgctgctccccacccgtccctctccacttcctttccattcac 360
|||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 501 gagcggagccctctgatttgctgctccccacccgcccctctctacttcctttccattcac 560
Query: 361 tatccaactttctca 375
|||||||||||||||
Sbjct: 561 tatccaactttctca 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
