Query= MSMg01no448_f08.b1 MSMg01no448_f08.b1 CHROMAT_FILE:
MSMg01no448_f08.b1 PHD_FILE: MSMg01no448_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:35 2005
(164 letters)
>mm_chr2_159044897_159045462
Length = 566
Score = 273 bits (141), Expect = 5e-78
Identities = 159/165 (96%), Gaps = 2/165 (1%)
Strand = Plus / Minus
Query: 1 cgccctttcattcaactgtttcctttga-ttttgtggactttgatgtatttctgctctct 59
|||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 365 cgccatttcattcaactgtttcctttgatttttgtggactttggtgtatttctgctctct 306
Query: 60 aaattctttcaagtggttatttatgtaatttgaggattctttgggcagtattactgtggg 119
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 305 aaattctttcaagtggttatttatgtaatttgagggttctttgggcagtattactgtggg 246
Query: 120 gtttctgaattttttgattagggatggtatattgtcttgg-tttt 163
||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 245 gtttctgaattttttgattggggatggtatattgtcttgggtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 566
Length adjustment: 8
Effective length of query: 156
Effective length of database: 558
Effective search space: 87048
Effective search space used: 87048
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_f08.g1 MSMg01no448_f08.g1 CHROMAT_FILE:
MSMg01no448_f08.g1 PHD_FILE: MSMg01no448_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:35 2005
(330 letters)
>mm_chr2_158877652_158878382
Length = 731
Score = 522 bits (270), Expect = e-152
Identities = 321/356 (90%), Gaps = 29/356 (8%)
Strand = Plus / Plus
Query: 4 gccactctgcctcaagatctccatgccaggatccaggtcagaaacttgtatctctcagcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gccactctgcctcaagatctccatgccaggatccaggtcagaaacttgtatctctcagcc 263
Query: 64 tccagatgaggatcacaggtgagccttccaattctggattgtagttcattccagatatag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tccagatgaggatcacaggtgagccttccaattctggattgtagttcattccagatatag 323
Query: 124 tcaagttgacaaccaggatagccactaccctggattggtggcacatgcctttacttccag 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaagttgacaaccaggatagccactaccctggattggtggcacatgcctttacttccag 383
Query: 184 tgctaaggaacagtttcttagcacagaagaggtagcgcatttacccagggatctgatatg 243
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 384 tgctaaggaacagtttcttagcacagaagaggtagtgcatttacccagggatctgagatg 443
Query: 244 ----------------------------tttttttttccccctgaggaaaaccaagagtc 275
||||||||| || |||||||||||||||||||
Sbjct: 444 gtttttttttttttgttgttgttgttgtttttttttttcctctgaggaaaaccaagagtc 503
Query: 276 accttttctgtccttggtgatagtttttgtttgttt-gtttgtttggttgtttgtt 330
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 504 accttttctgtccttggtgatagtttttgtttgttttgtttgtttgtttgtttgtt 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 731
Length adjustment: 9
Effective length of query: 321
Effective length of database: 722
Effective search space: 231762
Effective search space used: 231762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
