Query= MSMg01no448_g22.b1 MSMg01no448_g22.b1 CHROMAT_FILE:
MSMg01no448_g22.b1 PHD_FILE: MSMg01no448_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:42 2005
(360 letters)
>mm_chr2_79144576_79145335
Length = 760
Score = 630 bits (326), Expect = 0.0
Identities = 357/378 (94%), Gaps = 18/378 (4%)
Strand = Plus / Plus
Query: 1 agatggcatagggatgagaaatgtaaattttacaggatgaacaaacattgagagtcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agatggcatagggatgagaaatgtaaattttacaggatgaacaaacattgagagtcattt 242
Query: 61 tattcaaggatcttaaaaac---agaattcttctcagtc---------------agccat 102
|||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 243 tattcaaggatcttaaaaacagtagaattcttctcagtcaggcaatgttagcatagccat 302
Query: 103 gggtatctagagttcagaggcaaggagccctcccttgactggtaaaggaacttagtgctt 162
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gggtatctatagttcagaggcaaggagccctcccttgactggtaaaggaacttagtgctt 362
Query: 163 acaagtgattcagttggctcactcaggtaattgagtacctgctttgtgtatcagagcatg 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaagtgattcagttggctcactcaggtaattgagtacctgctttgtgtatcagagcatg 422
Query: 223 gtgtgactttgtgggtctattagtttgagaatatataattttccatttgagtattttttc 282
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 423 gtgtgactttgtgggtctattagtttgggaatatataattttccatttgagtattttttc 482
Query: 283 taagatatgtaggtttttggtttatcaagagactttgataaaaagtcgttgtgcaggtgc 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 taagatatgtaggtttttggtttatcaagagactttgataaaaagtcgttgtgcaggtgc 542
Query: 343 atgtgcagagagggagat 360
||||||| ||||||||||
Sbjct: 543 atgtgcaaagagggagat 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_g22.g1 MSMg01no448_g22.g1 CHROMAT_FILE:
MSMg01no448_g22.g1 PHD_FILE: MSMg01no448_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:42 2005
(415 letters)
>mm_chr2_79301214_79302023
Length = 810
Score = 733 bits (379), Expect = 0.0
Identities = 404/415 (97%), Gaps = 5/415 (1%)
Strand = Plus / Minus
Query: 1 ttgaatcgaaaataattatgcctttcaatgacaatgatgtctgaataacaccggatgaag 60
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 610 ttgaaacgaaaataattatgcctttcaatgacaatgatgtctgaataacactggatgaag 551
Query: 61 agtttgtttgctaatcgtatttagaaataaaaaccagtaagtatatgttctgactaaagt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 550 agtttgtttgctaatcgtatttagaaataaaaa-----aagtatatgttctgactaaagt 496
Query: 121 gtaatctgcttctgaaaagaattgggcttcttttcttttatttccacgtttctttgatca 180
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 495 gtaatctgcttctgaaaagaatttggcttcttttcttttatttccgcgtttctttgatca 436
Query: 181 atcccaatcaaactattttgcagacctaaaacactcgtgtcttggtttaagggtgcttgc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atcccaatcaaactatgttgcagacctaaaacactcgtgtcttggtttaagggtgcttgc 376
Query: 241 tcttcccagaatcacatttctgatagactgttttccagtgtattataaaatagccacgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcttcccagaatcacatttctgatagactgttttccagtgtattataaaatagccacgtg 316
Query: 301 taccaatgtggtatttaaagctttgtggtacatcaaatctgaaacatgtaatacaatttt 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 taccaatgtggtatttaaatctttgtggtacatcaaatctgaaacatgtaatacaatttt 256
Query: 361 gcttctgtaggcttatgtcacccataatggaagttatttatggtataaaacagct 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gcttctgtaggcttatgtcacccataatggaagttatttatggtataaaacagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 810
Length adjustment: 9
Effective length of query: 406
Effective length of database: 801
Effective search space: 325206
Effective search space used: 325206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
