Query= MSMg01no449_k13.b1 MSMg01no449_k13.b1 CHROMAT_FILE:
MSMg01no449_k13.b1 PHD_FILE: MSMg01no449_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:20 2005
(187 letters)
>mm_chr2_90630337_90630923
Length = 587
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%)
Strand = Plus / Plus
Query: 1 cagtttgccaactgagccatctccccagcacttgagaatttttttatcatcttattttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtttgccaactgagccatctccccagcacttgagaatttttttatcatcttattttct 260
Query: 61 ttcctttcttcttctctctgtgtatctttttgtctgtctatctgccctgtatatgtaact 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ttcctttcttcttctctctgtgtatctttttgtctgtctatctgccatgtatatgtaact 320
Query: 121 aaaagttgcatttacacaaggtaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aaaagttgcatttacacaaggtaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 380
Query: 181 gtgtgtg 187
|||||||
Sbjct: 381 gtgtgtg 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_k13.g1 MSMg01no449_k13.g1 CHROMAT_FILE:
MSMg01no449_k13.g1 PHD_FILE: MSMg01no449_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:20 2005
(199 letters)
>mm_chr2_90785991_90786588
Length = 598
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%), Gaps = 1/199 (0%)
Strand = Plus / Minus
Query: 1 accctcagctacaagtagtatttgatgacaaactgggacaaaatcctgtatcgagaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 accctcagctacaagtagtatttgatgacaaactgggacaaaatcctgtatcgagaaaca 339
Query: 61 aaaagtgtaaagtaggtttcgggtgtgtgtgtatgtttaatctggtgggctccagaacca 120
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aaaagtgtaaagtagg-tgcgggtgtgtgtgtatgtttaatctggtgggctccagaacca 280
Query: 121 catatataaggaaaggtatacatctgccaccctagctcttgagaagtggagacaagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 catatataaggaaaggtatacatctgccaccctagctcttgagaagtggagacaagtaaa 220
Query: 181 ccacaggttcaagccatcc 199
|||||||||||||||||||
Sbjct: 219 ccacaggttcaagccatcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 598
Length adjustment: 8
Effective length of query: 191
Effective length of database: 590
Effective search space: 112690
Effective search space used: 112690
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
