Query= MSMg01no450_c17.b1 MSMg01no450_c17.b1 CHROMAT_FILE:
MSMg01no450_c17.b1 PHD_FILE: MSMg01no450_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:59 2005
(241 letters)
>mm_chr2_51296689_51297329
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 caataggagcaaacagctacctgctattgacagcagaatctctacggttccaattttctc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 caataggagcaaacagctacctgctattgacagcagaatctcaacggttccaattttctc 260
Query: 61 cctaagctgtacaaagttcagttttcatagaaaatttctgagaatcttcagagacactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctaagctgtacaaagttcagttttcatagaaaatttctgagaatcttcagagacactta 320
Query: 121 tattcaatggtccttgctcaccgcactaaccaacctacctgggatgtttccatagtaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tattcaatggtccttgctcaccgcactaaccaacctacctgggatgtttccatagcaact 380
Query: 181 cctgacatttctgcttgagcataaaccctgctccatcactcttgccattgaaacagaatg 240
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Sbjct: 381 cctgacatttctgcttgagcataaaccctgctccatcactcttgccattgaaacagaatg 440
Query: 241 c 241
|
Sbjct: 441 c 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_c17.g1 MSMg01no450_c17.g1 CHROMAT_FILE:
MSMg01no450_c17.g1 PHD_FILE: MSMg01no450_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:59 2005
(349 letters)
>mm_chr2_51466237_51466985
Length = 749
Score = 584 bits (302), Expect = e-171
Identities = 314/322 (97%), Gaps = 8/322 (2%)
Strand = Plus / Minus
Query: 30 accacacttgcctttggcagatattttcttctagtttgcaagctgacttctcagtctctt 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 accacacttgcctttggcagatattttcttctagtttgcaagctgacttctcagtctctt 690
Query: 90 gatgttagctttcacagaacagaaagtttcttaacttcaatgaagttcactcattaattc 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gatgttagctttcacagaacagaaagtttcttaacttcaatgaagttcactcattaattc 630
Query: 150 cttctttcatggatcatgcatttgatgttggatataaaaagtcatcaccattctcagggt 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cttctttcatggatcatgcatttgatgttggatataaaaagtcatcaccattctcagggt 570
Query: 210 ccccaggctggctcctgtgtcacagggagcctagctttaa----ttttttctctggaaga 265
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 569 ccccaggctggctcctgtgtcacagggagcctagctttaaagcc----ttctctggaaga 514
Query: 266 tttgccacaagctgttgtgacttctgccaggtaggctggaaaataccactgagaaggcat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttgccacaagctgttgtgacttctgccaggtaggctggaaaataccactgagaaggcat 454
Query: 326 tcagtctaaggattctgaagca 347
||||||||||||||||||||||
Sbjct: 453 tcagtctaaggattctgaagca 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
