Query= MSMg01no450_p19.b1 MSMg01no450_p19.b1 CHROMAT_FILE:
MSMg01no450_p19.b1 PHD_FILE: MSMg01no450_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:05 2005
(498 letters)
>mm_chr2_143561590_143562486
Length = 897
Score = 661 bits (342), Expect = 0.0
Identities = 360/366 (98%), Gaps = 3/366 (0%)
Strand = Plus / Minus
Query: 134 gaatggagagatggctcagcatttaatagcaagtacttttctcgaagaggacccaaggtt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gaatggagagatggctcagcatttaatagcaagtacttttctcgaagaggacccaaggtt 838
Query: 194 ggctcccaaaactcaacgttggtcagctca-cagccaaccttgactccagctccagggtt 252
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
Sbjct: 837 ggctcccaaaactcaacgttggtcagctcacca-ccaaccttgactccagctccagggct 779
Query: 253 attgataacctcttctgacctctgtgggcgaccacactcacctacacaaagtctcacaca 312
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 actgataacctcttctgacctctgtgggcgaccacactcacctacacaaagtctcacaca 719
Query: 313 aacatgcatgcataaacataattaaacctggaaaaaaaaaactaaggctgaactctagat 372
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 718 aacatgcatgcataaacataattaaacctgg-aaaaaaaaactaaggctgaactctagat 660
Query: 373 gagacaaataatactggtgactgaatgtctcagaaggtgaaatcttggactccccctccc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gagacaaataatactggtgactgaatgtctcagaaggtgaaatcttggactccccctccc 600
Query: 433 tcctttttcattcctggaagctctgaagcagcagctcctgggtttagagtttgaaactca 492
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tcttttttcattcctggaagctctgaagcagcagctcctgggtttagagtttgaaactca 540
Query: 493 ttggct 498
||||||
Sbjct: 539 ttggct 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 897
Length adjustment: 10
Effective length of query: 488
Effective length of database: 887
Effective search space: 432856
Effective search space used: 432856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no450_p19.g1 MSMg01no450_p19.g1 CHROMAT_FILE:
MSMg01no450_p19.g1 PHD_FILE: MSMg01no450_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:05 2005
(381 letters)
>mm_chr2_143354211_143354991
Length = 781
Score = 698 bits (361), Expect = 0.0
Identities = 376/381 (98%)
Strand = Plus / Plus
Query: 1 acctttgtgagtattgttttacttagtataatctccaatcacattcattttcctataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttgtgagtattgttttacttagtataatctccaatcacattcattttcctataaat 260
Query: 61 gtcatgatttcatttttcctttgtggctgcataaaactgcattttgtataaggaccacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcatgatttcatttttcctttgtggctgcataaaactgcattttgtataaggaccacat 320
Query: 121 tttctttatccatttgtccattgaggttcatgtaggctgatcccatcctgtagctattgt 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tttctttatccatttgtccattgaggttcatgtaggctgattccatcctgtagctattgt 380
Query: 181 aaaggttgttgcaataaacatggatgtgaaatatctttgtggtgaattgatgtagagtcc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 aaaggttgttgcaataaacatggatgtgaagtatctttgtggtgaattgatgtagagtcc 440
Query: 241 ttctggtgtatatagtcaagagtggtgtgattggctactgtggcatggttagctcaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctggtgtatatagtcaagagtggtgtgattggctactgtggcatggttagctcaaatg 500
Query: 301 gtagctttattttcagtatttgaagcgcctctgtactgattgttgcagtagacatactga 360
|||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||
Sbjct: 501 gtagctttattttcagtatttgaagcacctctgtactgattgttgtagcagacatactga 560
Query: 361 tttacatttctggcagcagta 381
|||||||||||||||||||||
Sbjct: 561 tttacatttctggcagcagta 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
