Query= MSMg01no451_b16.b1 MSMg01no451_b16.b1 CHROMAT_FILE:
MSMg01no451_b16.b1 PHD_FILE: MSMg01no451_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:14 2005
(632 letters)
>mm_chr2_130468911_130469942
Length = 1032
Score = 1181 bits (611), Expect = 0.0
Identities = 626/631 (99%), Gaps = 2/631 (0%)
Strand = Plus / Minus
Query: 3 ggaattcattaaattcactataggaaataaaaacaattgtttaaaaaggcaaaaaaaatt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggaattcattaaattcactataggaaataaaaacaattgtttaaaaaggcaaaaaaaatt 678
Query: 63 aaaatctatgacatagtcctatgtcataggatggctaaactcatcagttatcacaatcac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaaatctatgacatagtcctatgtcataggatggctaaactcatcagttatcacaatcac 618
Query: 123 aacctacagccttttgctaaggcggaagcctgggcctagcttgcttcctcatactgatca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aacctacagccttttgctaaggcggaagcctgggcctagcttgcttcctcatactgatca 558
Query: 183 gaccaagggcatagttgaaggctgagtgcttcctttaggaagttttcctgggcagctggc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaccaagggcatagttgaaggctgagtgcttcctttaggaagttttcctgggcagctggc 498
Query: 243 aacccctttagtgtatgccacctgcacttgccaaggtgttgatctgagtcaaagataaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aacccctttagtgtatgccacctgcacttgccaaggtgttgatctgagtcaaagataaag 438
Query: 303 tctttactcaatctttttttaggatggggtttgttagttttacagcaggcacggggcaca 362
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctttactcaatctctttttaggatggggtttgttagttttacagcaggcacggggcaca 378
Query: 363 aggtataaaatacaaatttcctgtagcgtcaagttttaaattggtcaatttattggctct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggtataaaatacaaatttcctgtagcgtcaagttttaaattggtcaatttattggctct 318
Query: 423 tgcctccacctagatcatagtcacaggtgccttcacaccccctcatcttgtaggtttgaa 482
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 317 tgcctccacctagatcatagtcacaggtgccttcacacccccgcatcttgtaggtttgaa 258
Query: 483 ggctcttcagggtttttttggttttttt-tccccccttaattattttttaattcagtgta 541
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 ggctcttcaggg-ttttttggtttttttccccccccttaattattttttaattcagtgta 199
Query: 542 tggttgtttcgaccatatgtttgtgcagcacctgcagaggccagaaggtgtccaatccct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tggttgtttcgaccatatgtttgtgcagcacctgcagaggccagaaggtgtccaatccct 139
Query: 602 tgtaactagttatcatgtgggtgctgcgaat 632
|||||||||||||||||||||||||||||||
Sbjct: 138 tgtaactagttatcatgtgggtgctgcgaat 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_b16.g1 MSMg01no451_b16.g1 CHROMAT_FILE:
MSMg01no451_b16.g1 PHD_FILE: MSMg01no451_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:14 2005
(570 letters)
>mm_chr2_130305582_130306552
Length = 971
Score = 998 bits (516), Expect = 0.0
Identities = 562/588 (95%), Gaps = 18/588 (3%)
Strand = Plus / Plus
Query: 1 ctctgtagaccaggc----cttgaaatcagaagtcctcagaaaggcagcactgtctctgt 56
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctctgtagaccaggctggccttgaaatcagaagtcctcagaaaggcagcactgtctctgt 256
Query: 57 tcctgagtgctggaattaaagtcgtacgccaccaacgcccgcagtaacttgtttgaatac 116
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 257 cccggagtgctggaattaaagtcgtatgccaccaacgcccgcagtaacttgtttgaatac 316
Query: 117 atttttattatgtggaagtagcagatgatccttaggggatacttgggtggtgcagaactc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atttttattatgtggaagtagcagatgatccttaggggatacttgggtggtgcagaactc 376
Query: 177 taactagaattgctagcattttgatttttaaaaacttctctatcaatgtgcatatattta 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taactagaattgctagcattttgatttttaaaaacttctctatcaatgtgcatatattta 436
Query: 237 atactcagtgtgttagtcgggttccccaagacagaactagtgcagtgacagtggggacaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atactcagtgtgttagtcgggttccccaagacagaactagtgcagtgacagtggggacaa 496
Query: 297 caggttggagtgtggtgagtgatcagatttcagtgcacacctgggcaaaacctctgctta 356
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 497 caggttggagtgtggtgagtgatcagatttcagtacacacctgggcaaaacctctgctta 556
Query: 357 ccaagaccattaccagacaaggcagggaatgggtggaaattccatccaccacctagtcac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccaagaccattaccagacaaggcagggaatgggtggaaattccatccaccacctagtcac 616
Query: 417 tgagctggagtgtaacaaagcccacacagtagaaagctctcgtgctgaccatctcctcac 476
|||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 617 tgagctggagtgtaacaacgcacacacaatagaaagctctcgtgctgaccatctcctcac 676
Query: 477 agctgacagtcagttcttgtgtgcaggacgggtatgctcatgtagacacgtgtcctgtgc 536
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 677 agctgacagtcagttcttgtgtgcaggatgggtatgctcatgtagacacgtgtcctgtgc 736
Query: 537 atg--------------cacaaggtcaaccttggatgtcacttctcag 570
||| |||||||||||||||||||||||||||||||
Sbjct: 737 atgtcacacacaaggtgcacaaggtcaaccttggatgtcacttctcag 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space: 538160
Effective search space used: 538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
