Query= MSMg01no451_e09.b1 MSMg01no451_e09.b1 CHROMAT_FILE:
MSMg01no451_e09.b1 PHD_FILE: MSMg01no451_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:28 2005
(423 letters)
>mm_chr2_38371139_38371961
Length = 823
Score = 750 bits (388), Expect = 0.0
Identities = 414/428 (96%), Gaps = 10/428 (2%)
Strand = Plus / Plus
Query: 1 ccttttccccaaattgtttaaccctcacacttcaaaatcagtgtggctcttttaagggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttttccccaaattgtttaaccctcacacttcaaaatcagtgtggctcttttaagggga 260
Query: 61 atcctcctttgtctccctgacatccgagaggttcctgggttgtgccttacactctgactt 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 atcctcctttgtctccctgacatccgagaggctcctgggttgtgccttacactctgactt 320
Query: 121 ctctctcattctttcatgacccatttactaacacctatccttcggccctttaagctgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctctcattctttcatgacccatttactaacacctatccttcggccctttaagctgggg 380
Query: 181 atttctggga-----ttttttttatctgcaaaggggcatccttactttccaatgacctgc 235
|||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttctgggaaggactct-----atctgcaaaggggcatccttactttccaatgacctgc 435
Query: 236 tctgatgatgttcagggtctcgcagtgccaagaagagcaaatcaccagagcatggggcgg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 436 tctgatgatgttcagggtctcgcagtgccaagaagagcaaatcaccagagcatggggtgg 495
Query: 296 agatgagcacaggaggctacctaggctgaacttctgggattggaaacggtccagttatcc 355
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 496 agatgagcacaggaggctacctaggctgaacttctgggattggaaacggcccagttatcc 555
Query: 356 attttacagaatggaaactgaggccctgaaagggcgagatactcatagtcaaaataagaa 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 attttacagaatggaaactgaggccctgaaagggcgagatactcatagtcaaaataagaa 615
Query: 416 tatgtgcc 423
||||||||
Sbjct: 616 tatgtgcc 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_e09.g1 MSMg01no451_e09.g1 CHROMAT_FILE:
MSMg01no451_e09.g1 PHD_FILE: MSMg01no451_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:28 2005
(651 letters)
>mm_chr2_38519138_38520188
Length = 1051
Score = 716 bits (370), Expect = 0.0
Identities = 405/422 (95%), Gaps = 9/422 (2%)
Strand = Plus / Minus
Query: 223 atgcctctacttgcagaaacctccaagtcttttctggttcatatttcctcatcctctaca 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atgcctctacttgcagaaacctccaagtcttttctggttcatatttcctcatcctctaca 687
Query: 283 tctcagcttagacctttctaggttgtcttcatgccccctcccatattgagctgttttagg 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tctcagcttagacctttctaggttgtcttcatgccccctcccatattgagctgttttagg 627
Query: 343 atctactggtccctacaaatgcccagtaatttgcttactgcatacccactccaatatctg 402
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 626 atctactggtccctacaaatgcccagtaatttgcttactgcatacccacttcaatacctg 567
Query: 403 ggctgagctggacagaatgggcacctatgatccgagtagctgggcagactcaggtggaaa 462
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 566 ggttgagctggacagaatgggcacctatgatccgagtagctggacagactcaggtggaaa 507
Query: 463 ccttgtgactcaggtctgatctgtgtcttagggttagaggctgatgtgagagtctgctta 522
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 506 ccttgtgactcaggtctgatctgtgtcttagggttgggggctgatgtgagagtctgctta 447
Query: 523 atggaccccctaaggcctgacacctatcccactggctgtggccactggagaaaaacaaat 582
|||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 446 atggaccccctaaggcctga---------cactggctgtggccactggagagaaacaaat 396
Query: 583 atttagtactagcaccccgacccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 642
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atttagtactagcacccccacccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 336
Query: 643 tg 644
||
Sbjct: 335 tg 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
