NNTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACTCTGTACCCCATGAGCCTCAGCCACCTTGATAGCTCGGACA
GTAGATCTTCATCACAAGGCCCAGCTTTGAAGTGTTTTTAGTATATACTA
GTAATCTATGATGATAAAAATGTGTGCTTTTATTGTTATTTTACTGTTAG
GAAAACAACAGCATAAGACAGGCTAAGTGGACTTAATTAGTCTAAAATCC
TAAACTAGTATCTAGCATGGCATGTACCCTGAGGCCCCTAAGTCCCTATT
AAACTATTAAAAAGAAAAGAGGGATACAACTGAATGGAATAAAAAGCTCT
AGTTGCCTCTGAAGAAGATTGTTTCCCACTTCCTCTCCTTTGGAGAAACC
CAACCATGTTCCCAATTAACAGTAAAAAATTACATCTATACATATGTATA
TATACATGTCCAAGAATGCATGAGTGAATGAATGCCACAATGCATGCGTG
AGAGGACAACTACTGGGACCCAACCATGTGAGTTCTGGGTCATCTCAGGT
AGTCAGGCTTGGCAGCAGGAGCCTTTACCTGATGAACCACCTCACCAGCC
CATTGTTAATTAACATTTTAAAAATCATTTAGCTTTCCTGGATGTATCTC
CTATAACTGTGTTTAGCAAACTGCACCTATAGGTCAGATCTAGCCTAGGA
CCGATTTTTGGTGAATTAAGTCTTACTTGAACAAAAGCTGTACTCATTGC
TTTTATAGGGTATGT

NCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCT
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGA
TCAAAAACTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGA
ACACTCTTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATCAGTCTGGACGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATC
CTGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGTCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATTTACACAATGGAATACTACTCAGCTACTAAAAAAATGAAT
TTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAGGTAACCCAATCACAAAGGAACTTGCACAATATGTACTCACTGATAAG
TGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATACAACTTG
CTAAATGCATGAAATTCAAGAAGAAGGAAGACCAAAGTGTGGACACTTTT
ACCCTTCCTAGAAATGGGAACAAAN

Query= MSMg01no451_j15.b1 MSMg01no451_j15.b1 CHROMAT_FILE:
MSMg01no451_j15.b1 PHD_FILE: MSMg01no451_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:54 2005
         (684 letters)



>mm_chr2_38596290_38597373
          Length = 1084

 Score = 1284 bits (664), Expect = 0.0
 Identities = 676/680 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactctgtaccccatgagcctcagccaccttgatagctcggacagtagatcttca 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactctgaagcccatgagcctcagccaccttgatagctcggacagtagatcttca 264

                                                                       
Query: 65  tcacaaggcccagctttgaagtgtttttagtatatactagtaatctatgatgataaaaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcacaaggcccagctttgaagtgtttttagtatatactagtaatctatgatgataaaaat 324

                                                                       
Query: 125 gtgtgcttttattgttattttactgttaggaaaacaacagcataagacaggctaagtgga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgtgcttttattgttattttactgttaggaaaacaacagcataagacaggctaagtgga 384

                                                                       
Query: 185 cttaattagtctaaaatcctaaactagtatctagcatggcatgtaccctgaggcccctaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttaattagtctaaaatcctaaactagtatctagcatggcatgtaccctgaggcccctaa 444

                                                                       
Query: 245 gtccctattaaactattaaaaagaaaagagggatacaactgaatggaataaaaagctcta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtccctattaaactattaaaaagaaaagagggatacaactgaatggaataaaaagctcta 504

                                                                       
Query: 305 gttgcctctgaagaagattgtttcccacttcctctcctttggagaaacccaaccatgttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgcctctgaagaagattgtttcccacttcctctcctttggagaaacccaaccatgttc 564

                                                                       
Query: 365 ccaattaacagtaaaaaattacatctatacatatgtatatatacatgtccaagaatgcat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaattaacagtaaaaaattacatctatacatatgtatatatacatgtccaagaatgcat 624

                                                                       
Query: 425 gagtgaatgaatgccacaatgcatgcgtgagaggacaactactgggacccaaccatgtga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gagtgaatgaatgccacaatgcatgcgtgagaggacaactactgggacccaaccatgtga 684

                                                                       
Query: 485 gttctgggtcatctcaggtagtcaggcttggcagcaggagcctttacctgatgaaccacc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gttctgggtcatctcaggtagtcaggcttggcagcaggagcctttacctgatgaaccacc 744

                                                                       
Query: 545 tcaccagcccattgttaattaacattttaaaaatcatttagctttcctggatgtatctcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcaccagcccattgttaattaacattttaaaaatcatttagctttcctggatgtatctcc 804

                                                                       
Query: 605 tataactgtgtttagcaaactgcacctataggtcagatctagcctaggaccgatttttgg 664
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aataaccgtgtttagcaaactgcacctataggtcagatctagcctaggaccgatttttgg 864

                               
Query: 665 tgaattaagtcttacttgaa 684
           ||||||||||||||||||||
Sbjct: 865 tgaattaagtcttacttgaa 884


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space:   723876
Effective search space used:   723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)