Query= MSMg01no452_p03.b1 MSMg01no452_p03.b1 CHROMAT_FILE:
MSMg01no452_p03.b1 PHD_FILE: MSMg01no452_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:39 2005
(650 letters)
>mm_chr2_126695891_126696944
Length = 1054
Score = 1162 bits (601), Expect = 0.0
Identities = 631/643 (98%), Gaps = 4/643 (0%)
Strand = Plus / Plus
Query: 12 gaattctagagggttaagagtccaccatggcagggaaacagcatgagctcagggccttca 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gaattctagagggttaagagtccaccatggcagggaaacagcatgagctcagggccttca 271
Query: 72 ctctaactatggagcagagaaagaacggaagtaggctagacttgttcatcccaaagccca 131
|||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 272 ctctaactatggagcaaagaaagaacagaagtagtctagacttgttcatcccaaagccca 331
Query: 132 cccctaatgataaacttttttcagcaaagccgcaccacctaaccctcaagttaaccctgc 191
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 332 cccctaatgataaacttttttcagcaaagtcgcaccacctaaccctcaagttaaccctgc 391
Query: 192 tggtggtggcagcagctgcataagccttgaagccctccagagctcactcaaagcagatgc 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tggtggtggcagcagctgcataagccttgaagccctccagagctcactcaaagcagatgc 451
Query: 252 tttggaggcagactcttaacaaagtaacttttccctaacaatgcagtggatacatcaaat 311
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttggaggcagactcttaacaaagtaacttttccctaacaatgcagtggatacatcaaaa 511
Query: 312 aaatggagccacccatcaatagccaatgataatatttggatatatgacaaaaactaatct 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aaatggagccacccatcaatagccaatgataatatttggatatatgacaaaaactaatct 571
Query: 372 gaaaagaggatacctaaagaagtactagggcattatctactagaaagcctgggttttact 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaaaagaggatacctaaagaagtactagggcattatctactagaaagcctgggttttact 631
Query: 432 ctgtgaacaaatgctattaacacactgtctatctctgaatattttaacagttctttatta 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ctgtgaacaaatgctattaacacactgtctatctctgaatattttaacagttctttatta 691
Query: 492 atacatatatgttcctcagtccttaatacagaacttcctctcaaagacatctatttggtt 551
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 692 atacatatatgtttctcagtccttaatacagaacttcctctcaaagaaatctatttggtt 751
Query: 552 tagtagataacttttc----tcccaagaaccccctcacatactctgtcaaagtaaagtac 607
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tagtagataacttttcaatctcccaagaaccccctcacatactctgtcaaagtaaagtac 811
Query: 608 gtaaaatggagttgcatataacctgtctatatgtaaggaactt 650
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 812 gtaaaatggagttgcacataacctgtctatatgtaaggaactt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1054
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1044
Effective search space: 668160
Effective search space used: 668160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_p03.g1 MSMg01no452_p03.g1 CHROMAT_FILE:
MSMg01no452_p03.g1 PHD_FILE: MSMg01no452_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:40 2005
(339 letters)
>mm_chr2_126886111_126886849
Length = 739
Score = 630 bits (326), Expect = 0.0
Identities = 335/338 (99%)
Strand = Plus / Minus
Query: 1 gtagcaggtgatgcctgcccaatttgccaccactgatgttactaaagaacagtcgggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gtagcaggtgatgcctgcccaatttgccaccactgatgttactaaagaacagtcgggaga 479
Query: 61 ctatgcaaacaaagcacacagataagctactattactgacaaccttcaatcaagcctctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 478 ctatgcaaacaaagcacacagataagctactattactgacaaccttcaatcaagcccctt 419
Query: 121 gccctcagagaactcgcccatccaccctgatcattcttgttcatttatgtgggtcctgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gccctcagagaactcgcccatccaccctgatcattcttgttcatttatgtgggtcctgtg 359
Query: 181 ccttccactggcagaatggactttagagaaaaaacttacttacaggacatgtccccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccttccactggcagaatggactttagagaaaaaacttacttacaggacatgtccccttgg 299
Query: 241 tagtatattaccatgttagtaacagccctacagctggaagatgctgctgtgagagctaga 300
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 298 tagtacattaccatgttagtaacagccctacagctagaagatgctgctgtgagagctaga 239
Query: 301 ggaggcatttcccaccatgcacagatgaactccagttc 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ggaggcatttcccaccatgcacagatgaactccagttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
