Query= MSMg01no455_b18.b1 MSMg01no455_b18.b1 CHROMAT_FILE:
MSMg01no455_b18.b1 PHD_FILE: MSMg01no455_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:31 2005
(664 letters)
>mm_chr2_96762640_96763703
Length = 1064
Score = 1255 bits (649), Expect = 0.0
Identities = 660/664 (99%)
Strand = Plus / Minus
Query: 1 tccagtctgctaaagagtgggctctcaacacccatggaagccaagacaactttgatgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 tccagtctgctaaagagtgggctctcaacacccatggaagccaagacaactttgatgagt 898
Query: 61 atgaaggcatgttcctaagccacgcataacctctgctgtggattgtataggctccttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 atgaaggcatgttcctaagccacgcataacctctgctgtggattgtataggctccttcct 838
Query: 121 tcttcagtgaatgtcgaaatgcaggtgtcactacaacagtattaggatgtggatatctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tcttcagtgaatgtcgaaatgcaggtgtcactacaacagtattaggatgtggatatctgg 778
Query: 181 ggaattactgctctatattctgaggctggattaactttcacatatgaaatagttataaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ggaattactgctctatattctgaggctggattaactttcacatatgaaatagttataaag 718
Query: 241 cattaaggttccattatcttctatttatgcatacccacttgtccttctgatttttattca 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 717 cattaaggttccattatcttctatttatacatacccacttgtccttctgatttttattca 658
Query: 301 tgcatagaacagtatacaataaccactagatgtggagacagatgtagcctaataatcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgcatagaacagtatacaataaccactagatgtggagacagatgtagcctaataatcttg 598
Query: 361 ggggctaaaattaaacgaaataaagtagcaaacatatcagcttgtgaaatttcctcattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ggggctaaaattaaacgaaataaagtagcaaacatatcagcttgtgaaatttcctcattc 538
Query: 421 caactcttactaagaaaagtgttctccaagtttaaatattcaattcatgccagccctgtt 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 caactcttactaagaaacgtgttctccaagtttaaatattcaattcatgccagccctgtt 478
Query: 481 tttctaaccactctattaatactcacctaaattcataatgttagaggcatgactcatcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tttctaaccactctattaatactcacctaaattcataatgttagaggcatgactcatcat 418
Query: 541 gctaataatcttcataatcaaataactcaatgcatattcccaaggagacctganattcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 417 gctaataatcttcataatcaaataactcaatgcatattcccaaggagacctgaaattcaa 358
Query: 601 agtgctacattattagcagtgtcaacatgtctccataggtggagaagcacagtagaactc 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 357 agtgctacattattagcagtgtcgacatgtctccataggtggagaagcacagtagaactc 298
Query: 661 tctc 664
||||
Sbjct: 297 tctc 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_b18.g1 MSMg01no455_b18.g1 CHROMAT_FILE:
MSMg01no455_b18.g1 PHD_FILE: MSMg01no455_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:31 2005
(535 letters)
>mm_chr2_96674476_96675411
Length = 936
Score = 932 bits (482), Expect = 0.0
Identities = 529/560 (94%), Gaps = 27/560 (4%)
Strand = Plus / Plus
Query: 1 tgtgaaggtctgtagcaggtgcatttttctcttgtcttcctataaatgaacaacacagta 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tgtgaaggtctgtagcaggtgaatttttctcttgtcttcctataaatgaacaacacagta 238
Query: 61 taactctgaatcttctaggagaatcaactccaatttccatccacttggttcatcttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 taactctgaatcttctaggagaatcaactccaatttccatccacttggttcatcttttta 298
Query: 121 aaaggtatttgaatctagaagattaatatggctacaagttaactccgttcaaatcttgat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaaggtatttgaatctagaagattaatatggctacaagttaactccgttcaaatcttga- 357
Query: 181 ttttcctaaaagggaattagtatgctgtgtatgcacatctcccaaaagacgtcttttttt 240
|||||||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 358 ttttcctataagggaattagtgtgctgtgtatgcacatctcccaaaagaggtc-tttttt 416
Query: 241 tggttg-----gttttttttttttt--------------------caaaaaagaggcctt 275
|||||| |||||||||||||| |||||||||||||||
Sbjct: 417 tggttgttgttgttttttttttttttttttttttttttttttttccaaaaaagaggcctt 476
Query: 276 ttgtggtggtcttcataggggtgctggttttcaatgagtcagaacattattttgccaatt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttgtggtggtcttcataggggtgctggttttcaatgagtcagaacattattttgccaatt 536
Query: 336 tgctgatgttttccatttttaaagaagagacgtgtaaaaccaatcacattagatgtcttt 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tgctgatgttttccatttttaaagaagagacgtgtaaaaccaatcacattagatgtcttt 596
Query: 396 catctgcagagaaaccaaatgagaaacgtgcttggttattaaattacagaattagccttt 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 catctgcagagaaaccaaatgagaaacgtgcttggttattaaattacagaattagccttt 656
Query: 456 gaacactttttattgtttgtgttcgaagaggcaattcttgatattaaacttaacactgga 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gaacactttttattgtttgtgttcgaagaggcaattcttgatattaaacttaacactgga 716
Query: 516 ggagattactcaaccaccca 535
||||||||||||||||||||
Sbjct: 717 ggagattactcaaccaccca 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 936
Length adjustment: 10
Effective length of query: 525
Effective length of database: 926
Effective search space: 486150
Effective search space used: 486150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
