NATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCG
GAATTCTATTACTCCTCACATTTTGCAATCCTTTCTTGGTTCTGCCCACT
CATGTCTCAGAAACTATGCACCTGCTCTTTTTTTTGCCTAAGTTGTTCTA
CCACATATTTAAATGTTAGACTTCTATGCACTGAGATGTACCTTTAGCTC
TCAATCCTCAGGAATGGCCACTGTACTAATCTCATCCTAGATGAAGCAGC
ATTACCAGTATTCCTGGCATGCCTATCTATGGATTCCATTAAAAATTGTT
AATTCAAAATCTTTTGTCAGTGGTCACTCTTATAAAATCAGATCCAAGAA
GCTGAAGTTCTGTAGCTCTCTCTGGGATAGAGGGCTAAAAATAATCTGTG
CTGTGTTTGTCCAGCTCTTAACACATGATATATGGATTTGCTATTTTCAT
AGCCATGCATGCTATGATGAATATATAGTTCACAATGTAAGACTCTAGCA
AGCCTTAGCTTACTGGAGACCACGGGAATGAACCACACGGAGCCTGAACT
GATGCAAAAAGCAAGAGGAATTTATTGTTCCAGTGCACTAAGGCCGTCAA
AGCCCCCAAAGGAGAGGCAGCGACACCCAGGCAGCCTGGTTGGGTGAAAT
TTTTATTTGGTTTCCAGGGGCAGAACAAAACATTCTGCAATTAGGCTCAA
TAAGACTGGTTTGAAAAGGAGACCCTTTAAATTGAATGGGTTTTTTAGAA
ACCAAGGGATTCATAGCTTTT

NNNNNNNACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATAGAAAGACCAACA
GAGTCTACTAACCTAAAACCTTTGGGACTCTCAGAGACTGAACGGCACCA
AAAAGTATACATGGGCTGGACCTAAGCTCTGCACATATCTATAGCAGAAA
ATCAGCTTGGTCTTTGAGCGGATCCCCTAACTACTGGAGTGGGGCTGCTC
CTGACTATGTTGCTTGTGTGTGGATCAATTCCATTTCTCCTGACTTGGTC
CCGTTGTTTTCCCTCAGTGGCATATGAACCTAGTCCTGTAGTGACTTGAG
TGCCAGAGGGGGCATGAGAAGGGCAGAGGGAGTGGGGGAAGCAGCTGTAT
GAGAGGGTGACTGGGAAGAGAAGGGTGCTGATATTGGGATGTAAAGTGAA
TAAATAAAGTAATGGAAAAAAGAGCGCGACAGAAACGCATTATTCCTAGG
AAGAGGCTTTGCTCCTTTGTCATTCCAGTCTCAAGGATCCCAAGGAAATT
ACTCTGTAAACAATCCAATTTAATATTTTCTTTTTCAAATAAACAGCTGG
AATTTTCCTTTTGCCCTTTAAAAAAGCAGGTAGGAATCTTTGCTTCCTTT
TTTTTTTTTCCCAAATTTTTTTTTTTCTCCCCCTATGTGTGCCTCGGAGG
CACCTTCCTAAAATTTCTTGAAGTTTTTTTCTTTTTGATT

Query= MSMg01no457_j15.b1 MSMg01no457_j15.b1 CHROMAT_FILE:
MSMg01no457_j15.b1 PHD_FILE: MSMg01no457_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:52 2005
         (473 letters)



>mm_chr2_42351948_42352824
          Length = 877

 Score =  762 bits (394), Expect = 0.0
 Identities = 451/474 (95%), Gaps = 10/474 (2%)
 Strand = Plus / Minus

                                                                       
Query: 4   aatcctttcttggttctgcccactcatgtctcagaaactatgcacctgctcttttttttg 63
           ||||||||||      ||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 699 aatcctttct------tgcccactcatgtctcagaaattatgcacctgctctttcttttg 646

                                                                       
Query: 64  cctaagttgttctaccacatatttaaatgttagacttctatgcactgagatgtaccttta 123
           |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cctaagctgttctaccatatacttaaatgttagacttctatgcactgagatgtaccttta 586

                                                                       
Query: 124 gctctcaatcctcaggaatggccactgtactaatctcatcctagatgaagcagcattacc 183
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 585 gctctcaatgctcaggaatggccactgtactaatctcatcctagatgaagcagcattccc 526

                                                                       
Query: 184 agtattcctggcatgcctatctatggattccatt-aaaaattgttaattcaaaatcttt- 241
           || |||||| |||||||||||||||||||||||| ||||| |||||||||||||||||| 
Sbjct: 525 agcattcctagcatgcctatctatggattccattaaaaaaatgttaattcaaaatctttt 466

                                                                       
Query: 242 -tgtcagtggtcactcttataaaatcagatccaagaagctgaagttctgtagctctctct 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgtcagtggtcactcttataaaatcagatccaagaagctgaagttctgtagctctctct 406

                                                                       
Query: 301 gggatagagggct-aaaaataatctgtgctgtgtttgtccagctcttaacacatgatata 359
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gggatagagtgctaaaaaataatctgtgctgtgtttgtccagctcttaacacatgatata 346

                                                                       
Query: 360 tggatttgctattttcatagccatgcatgctatgatgaatatatagttcacaatgtaaga 419
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tggatttcctattttcatagccatgcatgctatgatgaatatatagttcacaatgtaaga 286

                                                                 
Query: 420 ctctagcaagccttagcttactggagaccacgggaatgaaccacacggagcctg 473
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 285 ctctagcaagccttagcttactggagaccacgggaatgaaccacatggagcctg 232


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 877
Length adjustment: 10
Effective length of query: 463
Effective length of database: 867
Effective search space:   401421
Effective search space used:   401421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)