Query= MSMg01no458_f08.b1 MSMg01no458_f08.b1 CHROMAT_FILE:
MSMg01no458_f08.b1 PHD_FILE: MSMg01no458_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:54 2005
(425 letters)
>mm_chr2_32370922_32371746
Length = 825
Score = 727 bits (376), Expect = 0.0
Identities = 412/424 (97%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 1 ccttgaacttagagatcctcctgcctcttcctcagagtgttggaattaaagacacctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ccttgaacttagagatcctcctgcctcttcctcagagtgttggaattaaagacacctgcc 259
Query: 61 accactgcacagtgtagcattatttttttattaaaaaaaattaaagcctgccacagaggc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 260 accactgcacagtgtagcattatttttttattaaaaaaaattaaaacctgccacagaggc 319
Query: 121 acaggatttaatcccaggacttacgaggcagagacgtgaggaactttgtgagtttgaggt 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 320 acaggatttaatcccaggacttaggaggcagagacgtgaggaactttgtgagtttgaggc 379
Query: 181 ctgcttggtctacagaccaagttccaggacagtcagggttatacagagaaaccctacctc 240
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 380 cagcttggtctacagaccaagttccaggacagtcaaggttatacagagaaaccctacctc 439
Query: 241 gaaaaattatggt-tttattttattattttatgtatatgaatattttgtttgtgtgtttt 299
||||| || | ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 aaaaaaaaatagaatttattttattattttatgtatatgaacattttgtttgtgtgtttt 499
Query: 300 aagtgcactgcacccatgtgtgacaggtaccctaggtggttagccaggtcccctgggttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagtgcactgcacccatgtgtgacaggtaccctaggtggttagccaggtcccctgggttg 559
Query: 360 tgtgtccctgtgtgggtgctgggaattaaacctgggtcctctgcaagagcatcaagtgct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtgtccctgtgtgggtgctgggaattaaacctgggtcctctgcaagagcatcaagtgct 619
Query: 420 ctta 423
||||
Sbjct: 620 ctta 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_f08.g1 MSMg01no458_f08.g1 CHROMAT_FILE:
MSMg01no458_f08.g1 PHD_FILE: MSMg01no458_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:54 2005
(479 letters)
>mm_chr2_32561215_32562093
Length = 879
Score = 835 bits (432), Expect = 0.0
Identities = 466/478 (97%), Gaps = 4/478 (0%)
Strand = Plus / Minus
Query: 1 cagccctttgctagagattggacccagaaccgggtaagtgctctaccactgagccacgcc 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cagccctttgctagagattgaacccagaaccgggtaagtgctctaccactgagccacgcc 480
Query: 61 cagtctcagggtttgtattcactgactccctccgcagcttcctggaagtcactgtgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cagtctcagggtttgtattcactgactccctccgcagcttcctggaagtcactgtgtata 420
Query: 121 atagatttattgttggatttagacttcaccacagcccaggggactttctccagtcgccat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 419 atagatttattgttggatttagacttcaccatagcccaggggactttctccagtcgccat 360
Query: 181 tttccggttgagtttcatggctgggaattcaggctctagtaggttccaattaatta-tcc 239
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 359 tttccggttaagtttcatggctgggaattcaggctctagtaggttccaattaattactc- 301
Query: 240 tgatgtattttagtccattagaagtgaaggcctggggctggagagatggctcagcagcta 299
||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgatggagtagagtccattagaagtgaaggcctggggctggagagatggctcagcagcta 241
Query: 300 agagcactgactgctcttctggaggtcctgagttcaaatcccagcaaccacatggtggct 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 240 agagcactgactgctcttctggaggtcctgagttcaaattccagcaaccacatggtggct 181
Query: 360 cacaaccatctgtaatgagatctgatgccctctctggtatgtctgaagacagctacagtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cacaaccatctgtaatgagatctgatgccctctctggtatgtctgaagacagctacagtg 121
Query: 420 tacttactatgtgtgataataaataaatctttcaaaaaaaaaaaaaaaaaagtgaagg 477
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 120 tacttactatgtgtgataataaataaatctttcaaaaaaaaaaaaaaaa--gtgaagg 65
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
