Query= MSMg01no459_f07.b1 MSMg01no459_f07.b1 CHROMAT_FILE:
MSMg01no459_f07.b1 PHD_FILE: MSMg01no459_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:13 2005
(477 letters)
>mm_chr2_44607944_44608821
Length = 878
Score = 851 bits (440), Expect = 0.0
Identities = 452/456 (99%), Gaps = 1/456 (0%)
Strand = Plus / Minus
Query: 23 gaacactggcttgttcacaggctcccatttacacagcccagtcccacctacctagggatg 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 gaacactggcttgttcacaggctcccatttacacagcccagtcccacctacctagggatg 819
Query: 83 gcaccacccatagtgggcttcactctcccaagatcaattagtaatcaagaacatggcaca 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gcaccacccatagtgggcttcactctcccaagatcaattagtaatcaagaacatggcaca 759
Query: 143 gaaacaatgcacatggcctagactgatgaaggcagttcttcaattcacgttccctttttt 202
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 758 gaaacaatgcacatggcctagactgatgaaggcagttcttcaattcacgttccccttttt 699
Query: 203 taggtgtgtcaagttgacatgtaggtgtaccaagataaggcatcatagatatttttaaga 262
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 698 taggtgtgtcaagttgacatgtaggtgtaccaagataaggcatcatagacatttttaaga 639
Query: 263 accaaatcttattaaattaattttttcatgttatactttgaggtttatttagcctaccca 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 accaaatcttattaaattaattttttcatgttatactttgaggtttatttagcctaccca 579
Query: 323 ttgctaccgttggtgttcagacagtatgtagtagacattaagaaaattacttttattttt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttgctaccgttggtgttcagacagtatgtagtagacattaagaaaattacttttattttt 519
Query: 383 atattatctaaaacctgcattaacaatatatttcatattt-aaaaaatattgacaagaga 441
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 518 atattatctaaaacctgcattaacaatatatttcatatttaaaaaaatattgacaagaga 459
Query: 442 cagattgtctgaatcatcattactgcatttcttttg 477
||||||||||||||||||| ||||||||||||||||
Sbjct: 458 cagattgtctgaatcatcaatactgcatttcttttg 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space: 405356
Effective search space used: 405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_f07.g1 MSMg01no459_f07.g1 CHROMAT_FILE:
MSMg01no459_f07.g1 PHD_FILE: MSMg01no459_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:13 2005
(354 letters)
>mm_chr2_44393259_44394012
Length = 754
Score = 669 bits (346), Expect = 0.0
Identities = 352/354 (99%)
Strand = Plus / Plus
Query: 1 tgtcgctagatactaaattgaaattttaaggaaatgatggaaacggctggaagggaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcgctagatactaaattgaaattttaaggaaatgatggaaacggctggaagggaaaga 260
Query: 61 ggtagccttttaaatctaatttgttatgcaccgcagtagggtaatggatgcaatgagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtagccttttaaatctaatttgttatgcaccgcagtagggtaatggatgcaatgagagg 320
Query: 121 tcttttatggagttcccacgtccaaaaggtattttggtagcaaaggttgttaagcagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttttatggagttcccacgtccaaaaggtattttggtagcaaaggttgttaagcagact 380
Query: 181 ccctacggttctcttcaactgaagatggtagggtatgaggtatataggtctgtgtcctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctacggttctcttcaactgaagatggtagggtatgaggtatataggtctgtgtcctcc 440
Query: 241 tgttttttatttccttgggaataaaacggcaaaggacaccttcggctgcttagaaatcac 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatttttatttccttgggaataaaacggcaaaggacaccttcggctgcttagaaatcac 500
Query: 301 aaaggggttgtcagaaccctcacagtcagcttgaatagaggatggagctgaagg 354
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaggggttgccagaaccctcacagtcagcttgaatagaggatggagctgaagg 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
