Query= MSMg01no459_f13.b1 MSMg01no459_f13.b1 CHROMAT_FILE:
MSMg01no459_f13.b1 PHD_FILE: MSMg01no459_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:14 2005
(577 letters)
>mm_chr2_73919128_73920105
Length = 978
Score = 1079 bits (558), Expect = 0.0
Identities = 570/574 (99%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 5 gaattccttcatac-ccaccccaaattagcctgccctgaaaatcctacttatatttcaaa 63
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gaattccttcagacatcaccccaaattagcctgccctgaaaatcctacttatatttcaaa 719
Query: 64 ttttgatttgtctaaattttaaacaccaactttaaacttacatccccttattttgagcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ttttgatttgtctaaattttaaacaccaactttaaacttacatccccttattttgagcct 659
Query: 124 taaccactatttggtatttatggaaaacagctctcagttaatgaaagagaatatatacca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 taaccactatttggtatttatggaaaacagctctcagttaatgaaagagaatatatacca 599
Query: 184 ttaaaaatctatatgccgattagatttatagagcataattcaataattttttataaagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttaaaaatctatatgccgattagatttatagagcataattcaataattttttataaagca 539
Query: 244 ataaaaacacttgccaactctcatgaaaaacaaccatatgttttggttttaataatgaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ataaaaacacttgccaactctcatgaaaaacaaccatatgttttggttttaataatgaaa 479
Query: 304 atgttttataaataagctccaattatggtccatattatttaagaagcattgaatcttttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atgttttataaataagctccaattatggtccatattatttaagaagcattgaatcttttc 419
Query: 364 ttccaagtattttttctccatttttgagacacccttaataatttgcatacatatttacag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttccaagtattttttctccatttttgagacacccttaataatttgcatacatatttacag 359
Query: 424 tgttgccagatttattatttttttaaccaccaaaaaaagacatttaatttttttctcttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgttgccagatttattatttttttaaccaccaaaaaaagacatttaatttttttctcttt 299
Query: 484 ggtttctagtgttccctaaaaggacatttctcacactagatgactaatgtatcaattaca 543
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 298 ggtttctagtgttccctaaaaggacatttctcaaactagatgactaatgtatcaattaca 239
Query: 544 aaaacattttatccttttaagaactatttttaac 577
||||||||||||||||||||||||||||||||||
Sbjct: 238 aaaacattttatccttttaagaactatttttaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 978
Length adjustment: 10
Effective length of query: 567
Effective length of database: 968
Effective search space: 548856
Effective search space used: 548856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_f13.g1 MSMg01no459_f13.g1 CHROMAT_FILE:
MSMg01no459_f13.g1 PHD_FILE: MSMg01no459_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:14 2005
(394 letters)
>mm_chr2_73762738_73763531
Length = 794
Score = 696 bits (360), Expect = 0.0
Identities = 384/392 (97%)
Strand = Plus / Plus
Query: 1 attgatatgaaactttggtccactgtttcatatcccatataattttacgaggtaaattta 60
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 attgatatgaaacttttgtccactgtttcatatcccatataattttatgaggtaaattta 260
Query: 61 tttttcagcactcctaacataattttaaaaatgaggtgaccatggattatggaggttaag 120
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tttttcagcgctcctaacataattttaaaaatgaggcgaccatggattatggaggttaag 320
Query: 121 aggttgcccaagttcacataagacataacttgtaaacctttctttaacatatttgccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggttgcccaagttcacataagacataacttgtaaacctttctttaacatatttgccaga 380
Query: 181 aagtaagtgctctgtgataacttggaacattatattaaatatcggctctgttgttatgcg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtaagtgctctgtgataacttggaacattatattaaatatcggctctgttgttatgca 440
Query: 241 actgtgagagatgtatgatgaaaaacatagatgctttttagcttttccctgtttcttaaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtgagagatgtatgatgaaaaacatagatgctttttagcttttccctgtttcttaaa 500
Query: 301 gcactgtacactcatgctaatggcattggctggaaattctgcagtgtgcaccttagagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 gcactgtacactcatgctaatggcattggctggaaattctgcagtgtgcacctcagagag 560
Query: 361 cacccacttgggggcacccacaatgcagcttt 392
|||||||||||||||||||||||||||||||
Sbjct: 561 tacccacttgggggcacccacaatgcagcttt 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
