CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAACCGCGGAATT
CCAACCATTCCCAAGAAACAGGAGATTCTGAAATTCCGCACTGGCGCAGA
ATCCTTGGTGTTTGACATGTGCCCGCTGTGGATTTGGTAATTTGCCATTC
GGTAAGTTCTTTATGCACAACTTTCTCCTCAAGCTGGCAAGCAAGTGTGA
TGACCTTTTTGTGAGATCTCTGAGCTGCTGACTCTCCCCTTACCACTCCA
CACTGATGCTTGTTCACTTCCCAAATTACCACTGAGGAACTGCCATCCCC
ATCCCTCCACCCTTTTTCCTCCATCCCCGTTCCTCTACCCCCCCTCCATT
CACACCCCTTCATCCCCACCCCTCTACCCCCACTTCTCCATCCACACCCT
CCACCCCAACCCCTCCACCCCCACTCCTCCATCCCTACTTCTCCACCCCA
CTCCACCCCAACTCCTCTATCCACACACCCTACCCCACCCCCTCCATCTC
CATTCCTCCACCGCTACTCCTCTACCCCCAGACACAAAGAATAGATCTAC
AGAGATGTTCACTTGAGCATGCCTTACCCATGAAAGGCAAGGCTATTGAG
TACTAAACTGTTTCCATACAGCAGGTTTTTCTTTTTTCCTTCTTTCTTAC
CTTTTTTCTCGAGAATTCAAGCAAGACTTCCATTCCGGATGACCTGTATC
ATTGACTGGCTTTTGTGACTGGAATATGTCCATCTCA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGTGATGCACAGGCATCACTGAAGATGGC
TGCTGCTTTGGGGTGGCTAAAGGCCGGAGAAGATCANACTGATCAACTCG
CAAACTTCCTAAACCATGAGCCTCTGGATTTCACTTTATCTTATTTGTCG
TTGTTACTTTTGGAATATGTGTGTGTGAAGGAAGCAGGTGGGATGTGGTT
ACATGCACCATAACAGGCAACCAGGAAACTCTCATGATGATCAATTTGCA
GCAGTCAGTCCTCTTTTTCTACCACGTGGATCTTAGGAATCTAACTCAGA
TCTTCAGGCTTGGTAGCAAGAGCCTTTTCCTGTTACGTGCCTTTCCTTGC
TGGCCCCTTAAATTGCTTGATGGCTTTTATTGATGTCTGTATTGGTGTGT
GTGCATATGACATGCCATGAAGTGAAGATGTCAGAGAATAACATTTGGAA
ATCAGTTTCCTCCTCTTATATACATAGGTCCTGGTGATCAAATACATATC
ATTAGACTTGGCAGGTAGTGTCGTAACCCACTGAGCAATCTTGTCAGGTC
ATGGTATCCATCTATCCATCCATCTATCTTCCTTCCTTCCTTCCTTCCTT
CCTTCCTTCCTTTCCTCTTTCCTTCTTTCCTTCCTTCCTTCCTTTTTTAT
TCTTTCACTCTCTCTTTTCTTTTTTTTTTG

Query= MSMg01no461_a13.b1 MSMg01no461_a13.b1 CHROMAT_FILE:
MSMg01no461_a13.b1 PHD_FILE: MSMg01no461_a13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:28 2005
         (550 letters)



>mm_chr2_146373082_146374031
          Length = 950

 Score =  872 bits (451), Expect = 0.0
 Identities = 463/467 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaaacaggagattctgaaattccgcactggcgcagaatccttggtgtttgacatgtgccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaaacaggagattctgaaattccgcactggcgcagaatccttggtgtttgacatgtgccc 408

                                                                       
Query: 61  gctgtggatttggtaatttgccattcggtaagttctttatgcacaactttctcctcaagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gctgtggatttggtaatttgccattcggtaagttctttatgcacaactttctcctcaagc 348

                                                                       
Query: 121 tggcaagcaagtgtgatgacctttttgtgagatctctgagctgctgactctccccttacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tggcaagcaagtgtgatgacctttttgtgagatctctgagctgctgactctccccttacc 288

                                                                       
Query: 181 actccacactgatgcttgttcacttcccaaattaccactgaggaactgccatccccatcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 actccacactgatgcttgttcacttcccaaattaccactgaggaactgccatccccatcc 228

                                                                       
Query: 241 ctccaccctttttcctccatccccgttcctctaccccccctccattcacaccccttcatc 300
           |||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ctccacccctacccctccatccccgttcctctaccccccctccattcacaccccttcatc 168

                                                                       
Query: 301 cccacccctctacccccacttctccatccacaccctccaccccaacccctccacccccac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cccacccctctacccccacttctccatccacaccctccaccccaacccctccacccccac 108

                                                                       
Query: 361 tcctccatccctacttctccaccccactccaccccaactcctctatccacacaccctacc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tcctccatccctacttctccaccccactccaccccaactcctctatccacacaccctacc 48

                                                          
Query: 421 ccaccccctccatctccattcctccaccgctactcctctacccccag 467
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  ccaccccctccatctccattcctccaccgctactcctctacccccag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space:   507600
Effective search space used:   507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no461_a13.g1 MSMg01no461_a13.g1 CHROMAT_FILE:
MSMg01no461_a13.g1 PHD_FILE: MSMg01no461_a13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:28 2005
         (246 letters)



>mm_chr2_146215722_146216367
          Length = 646

 Score =  460 bits (238), Expect = e-134
 Identities = 244/246 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaccacgtggatcttaggaatctaactcagatcttcaggcttggtagcaagagcctttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaccacgtggatcttaggaatctaactcagatcttcaggcttggtagcaagagcctttt 260

                                                                       
Query: 61  cctgttacgtgcctttccttgctggccccttaaattgcttgatggcttttattgatgtct 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 cctgttacgtgcctttccttgctggccccttaaattgtttgatggcttttattgatgtct 320

                                                                       
Query: 121 gtattggtgtgtgtgcatatgacatgccatgaagtgaagatgtcagagaataacatttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtattggtgtgtgtgcatatgacatgccatgaagtgaagatgtcagagaataacatttgg 380

                                                                       
Query: 181 aaatcagtttcctcctcttatatacataggtcctggtgatcaaatacatatcattagact 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 aaatcagtttcctcctcttatatacataggtcctggtgatcaaacacatatcattagact 440

                 
Query: 241 tggcag 246
           ||||||
Sbjct: 441 tggcag 446


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space:   150969
Effective search space used:   150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)