ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAATCCGCGGAAT
TCTTTGTTCTGCCCTGTACCCCATTTTTCAATAGGGTTATTTGGTTTTCT
GGAGTCCAACTTCTTGAGTTTTTTTATATATACTGGATATTAGTCCCCAT
CAGATTTAGGATTGGTAAAGTTATTTTTCCAATCTGTTGGTGGCCCTTTT
GTCTTATTGATGGTGTCTTTTGCCTTACAGAAGTTTTGCAATTTTATGAG
GTCCCATTTGTCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTCTGT
TAAGAAAATTTTCCCTATGTCCATGTGCTCAATCTCTCCCTCACTTTCTC
CTCTATAAGTTTCACTGTTTCTGGTTTTATATAGAGGTCCTTGATCCATT
TAGACTTGAGCTTTGCACAAGGAGATAAGAATGGATCAATTGTCATCCTT
CTACATGCTAACCACCAGTTGAGCTAGCACCATTTGTTGAAAATTCTTTT
TTCCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAGGTGACCATAGGT
GTGTGGGTTCATTTCTGGGTCTTCAGNTCCATTGATCTATCTGTCTGCCA
CTGTACCCAGTTTCAAGCAGTTTTTTACCTAATTGGCTCTGGTATTACAT
CTTTGAGTCCAGGGAAAATCCCCCCATCAAAGAAAGGGAACTCTATAAAG
GGGTTACTCTTTTTTCCCGTAATTATATTTCTTTCCTTNACTCCCCCTGC
ATTCCCTTAAATCCTTTG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATGTTTTCAGAGTTCTTTCCCACAGCTTT
AAAGGATGTCCTGAAGGTCTCAGCATTTACCATTTTGCTAAGATATTAGC
CGCACACTCTCATATACGTGACTAATGCTGTGTCTGATTATCATGGATGA
GAAACATGAAGATATACACACACACACACACACAAAACACACACACACAC
AAGGCTTATACCTACAGCAACTATTGGCATTCTTGAAGGCCTATGCCTTG
CTGGTTCTCTTCCATGTTATGTCAAGCCATACCAGCAGGACTTGCCAACT
TCCTTCTTCCCAAATAGAAATAAAACTAAGAATAAAAGAAACCAGTACAA
TAAAAAATATTCAAACAAAGCAAACTGAGACAAAAAGTATCTATAAAAAT
TCTATTGAGTTAGTTTTGTTTTGGCCAGTGATTCCTAAGCATAGAACTTG
CCCTGAAGTATATTTAANATACCCAGTGAAACATTTTTGGAGAAAAATGA
CTTTTCCTTTGGTAGTGGATATTAGTTGTAGGTAGCTTCTTGGTCCGGGT
AAGATGTCCACATCTATTACAACTTTTGTGGAGCTTCTTACACAATTTTT
TTATTACATTGTTCACTTCTTATTACCGAAATACCACCATACTCTCTAAC
GGATACTCCTTTGAGGACTTTTATCCTTCTCTATCCTTTCATCAACCATC
GGTCTTCTTC

Query= MSMg01no461_d17.g1 MSMg01no461_d17.g1 CHROMAT_FILE:
MSMg01no461_d17.g1 PHD_FILE: MSMg01no461_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:45 2005
         (492 letters)



>mm_chr2_44648045_44648937
          Length = 893

 Score =  866 bits (448), Expect = 0.0
 Identities = 487/511 (95%), Gaps = 19/511 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgttttcagagttctttcccacagctttaaaggatgtcctgaaggtctcagcatttacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atgttttcagagttctttcccacagctttaaaggatgtcctgaaggtctcagcatttacc 670

                                                                       
Query: 61  attttgctaagatattagccgcacactctcatatacgtgactaatgctgtgtctgattat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 attttgctaagatattagccgcacactctcatatacgtgactaatgctgtgtctgattat 610

                                                                       
Query: 121 catggatgagaaacatgaagat------------atacacacacacacacacacaaa--- 165
           ||||||||||||||||||||||            | |||||||||||||||||||||   
Sbjct: 609 catggatgagaaacatgaagatacacacacacacacacacacacacacacacacaaaaca 550

                                                                       
Query: 166 ---acacacacacacacaaggcttata-cctacagcaactattggcattcttgaaggcct 221
              |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 549 cacacacacacacacacaaggcttataccctacagcaactattggcattcttgaaggcct 490

                                                                       
Query: 222 atgccttgctggttctcttccatgttatgtcaagccataccagcaggacttgccaacttc 281
           ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 489 atgccttgctggttctcttccatgccatgtcaagccataccagcaggacttgccaacttc 430

                                                                       
Query: 282 cttcttcccaaatagaaataaaactaagaataaaagaaaccagtacaataaaaaatattc 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cttcttcccaaatagaaataaaactaagaataaaagaaaccagtacaataaaaaatattc 370

                                                                       
Query: 342 aaacaaagcaaactgagacaaaaagtatctataaaaattctattgagttagttttgtttt 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaacaaagcaaactgagacaaaaagtatctataaaaattctattgagttagttttgtttt 310

                                                                       
Query: 402 ggccagtgattcctaagcatagaacttgccctgaagtatatttaanatacccagtgaaac 461
           ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 309 ggccaatgattcctaagcatagaacttgccctgaagtatatttaaaatacccagtgaaac 250

                                          
Query: 462 atttttggagaaaaatgacttttcctttggt 492
           |||||||||||||||||||||||||||||||
Sbjct: 249 atttttggagaaaaatgacttttcctttggt 219


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 893
Length adjustment: 10
Effective length of query: 482
Effective length of database: 883
Effective search space:   425606
Effective search space used:   425606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)