Query= MSMg01no461_l08.b1 MSMg01no461_l08.b1 CHROMAT_FILE:
MSMg01no461_l08.b1 PHD_FILE: MSMg01no461_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:24 2005
(247 letters)
>mm_chr2_74650626_74651272
Length = 647
Score = 478 bits (247), Expect = e-139
Identities = 247/247 (100%)
Strand = Plus / Plus
Query: 1 aaatttttggagtgtgttccaagacacatctcatcacgggaaatccttttggaagaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatttttggagtgtgttccaagacacatctcatcacgggaaatccttttggaagaaaag 260
Query: 61 gttggttaaggaatttttaaatcatttggttaaagaagtttgattcagtgtggtggctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttggttaaggaatttttaaatcatttggttaaagaagtttgattcagtgtggtggctca 320
Query: 121 tgcctttgatcccagcactcagagcgcatatgagtctttgtgagtctgaggcagcctcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctttgatcccagcactcagagcgcatatgagtctttgtgagtctgaggcagcctcat 380
Query: 181 gattttagtgacatccaggccagcaagggctacacagtgagactctattctccccccagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattttagtgacatccaggccagcaagggctacacagtgagactctattctccccccagc 440
Query: 241 ccctgac 247
|||||||
Sbjct: 441 ccctgac 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_l08.g1 MSMg01no461_l08.g1 CHROMAT_FILE:
MSMg01no461_l08.g1 PHD_FILE: MSMg01no461_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:24 2005
(238 letters)
>mm_chr2_74826168_74826805
Length = 638
Score = 420 bits (217), Expect = e-122
Identities = 234/241 (97%), Gaps = 3/241 (1%)
Strand = Plus / Minus
Query: 1 aggccaggaagcaggagtgggtgggttggggagcacggca---ggtggggcataggggct 57
||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 546 aggccaggaagcaggagtgggtgggttggggagcagggcatgggggggggcataggggct 487
Query: 58 ttggggatagcatttgaaatgtaaatgaagaaaatatctaataaaaaaagaccactgcta 117
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 486 ttggggatagcatttgaaatgtaaatgaagaaaatatctaataaaaaaagacaactgcta 427
Query: 118 tgagaagagtgatgtttggtccttttctctgcctgctcctactctagatgagaccatgtc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tgagaagagtgatgtttggtccttttctctgcctgctcctactctagatgagaccatgtc 367
Query: 178 ctcttacacacaactctccctatcacatgccaaataaatgggatcaaccaatcctggaat 237
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 366 ctcttacacacaactctccctatcacatgccaaataaatgggattaaccaatcctggaat 307
Query: 238 g 238
|
Sbjct: 306 g 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
