Query= MSMg01no462_a05.b1 MSMg01no462_a05.b1 CHROMAT_FILE:
MSMg01no462_a05.b1 PHD_FILE: MSMg01no462_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:51 2005
(549 letters)
>mm_chr2_17785719_17786668
Length = 950
Score = 946 bits (489), Expect = 0.0
Identities = 530/553 (95%), Gaps = 19/553 (3%)
Strand = Plus / Plus
Query: 1 gaattcccttctctg--tttct--cagacacttactgtgttccccttgctactatatcaa 56
||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcccttctctgca---ctgccagacacttactgtgttccccttgctactatatcaa 257
Query: 57 caccctgccttcctccttcttcaactcttcctggggaattcactttgagatggtgtttcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caccctgccttcctccttcttcaactcttcctggggaattcactttgagatggtgtttcc 317
Query: 117 gtgtttataagaaaattactaaataaagacaaggatggatggaaaatgaagcatttcttc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtgtttataagaaaattactaaataaagacaaggatggatggaaaatgaagcatttcttc 377
Query: 177 tctggacacttacctgactaacaccagatcttcctcctcctcctccacttcttcctctcc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctggacacttacctgactaacaccagatcttcctcctcctcctccacttcttcctctcc 437
Query: 237 ctcttcttctgcatcttcttctgcttctgcgtcttgtatgtatgtgagtgttttgcctgt 296
||||||||||||| |||||| ||||| ||| |||||||||||||||||||
Sbjct: 438 ctcttcttctgca------tctgct------tcttgaatgcatgtgagtgttttgcctgt 485
Query: 297 ttgtttgtctgtgtacctggtgaacacctggtgcctgtggaggcctgaagagtgcaacaa 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 486 ttgtttgtctgtgtacctggtgaacacctggtgcctgtggaggcctgaagagtgcagcaa 545
Query: 357 accccctgggactgaagttactgacagtgtgaactgttcattggttgcttggaatcaaaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 accccctgggactgaagttactgacagtgtgaactgttcattggttgcttggaatcaaaa 605
Query: 417 ccaattcctctggaaaaaaacaatcgatgctattaacctctgagccacctccagccccct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ccaattcctctggaaaaaaacaatcgatgctattaacctctgagccacctccagccccct 665
Query: 477 aacactggattttagtagaaatctcactaatgcacagtgaaatgcccctcattaatgaat 536
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 666 aacactggattttagtagaaatctcactaatgcacagtgaagtgcccctcattaatgaat 725
Query: 537 aattccccagtaa 549
|||||||||||||
Sbjct: 726 aattccccagtaa 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_a05.g1 MSMg01no462_a05.g1 CHROMAT_FILE:
MSMg01no462_a05.g1 PHD_FILE: MSMg01no462_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:51 2005
(530 letters)
>mm_chr2_17930260_17931184
Length = 925
Score = 534 bits (276), Expect = e-156
Identities = 315/336 (93%), Gaps = 17/336 (5%)
Strand = Plus / Minus
Query: 199 tccttgagacagggtctcctgtagctcctgttggccttgaacttgttatttta------t 252
|||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 925 tccttgagacagggtctcctgtagctcctgttggccttgaacttgtta---taagaccg- 870
Query: 253 ttagggtgactttgaattgctaatcctcttgcatgtaccttctctgttctggtattacag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 --agggtgactttgaattgctaatcctcttgcatgtaccttctctgttctggtattacag 812
Query: 313 aagtgtgttcttgggcccaacttatgtggtgctggaaatcgaacccagagcttcatgcct 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aagtgtgttcttgggcccaacttatgtggtgctggaaatcgaacccagagcttcatgcct 752
Query: 373 gctagacaagcactctgctaaatctccaatttctcttttaagtcttaagggctattatac 432
||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 751 gctagacaagcactctgctaaatctccaatttctcttttcagtctcaagggct-tt---- 697
Query: 433 cttccctggacatcacttacctcagccctttcccaccaagagtttttacctcttgaacta 492
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 696 cttccctggacatcacttacctcagccctttcccatgaagagtttttacctcttgaacta 637
Query: 493 tgtgtggtgtgctttggcccaggttgatgatgcaaa 528
||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgtgtggtgtgctttggcccaggttgatgatgcaaa 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 925
Length adjustment: 10
Effective length of query: 520
Effective length of database: 915
Effective search space: 475800
Effective search space used: 475800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
