NGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCACTTGTTTTCTCGCCTTACCTGAGCATGTGCCTCTTTCTTC
GTTCTTAAACCCACCCATGCAAACACTTACAAGTTTTTTTATAGAATTAT
GTGTTTATGTTTTCTAGAGGATTACAAATATAGACACCAATACATGATTG
CAAATAATCTATTTTTTTTATTGAGAACAATTATTTTGAGACACAAACAT
GTTTTATATAGCTTTTTAACAAGGATTATTATTTCTATGTATTTACTCAG
GTATCCATTAACAAATTACCAGGTGAATAAATTGTGGCATATTTATGTAA
TTGAATATGGAAAGACAGTGAAAACAATAAATTGTTAATATGATAAATAT
GAATTGATTAAGGTAAATAATTATTTTTCTAAAAAATAAAAAGTTTTAAA
ATGGCATAATTATTATTATATAAAGTCTAGAAGCAGGAAAGAAAAAGATA
AATTGTCAAGGAATAACAGTGAATCTCATGAAAGTAAAAAATACTGTCCA
ATATCATAATTGGTGGTTTATCCTAGTTTATATACTTATTAAAATTTCAG
GAATTTTATACTACTTAAAGTCTATGGATTTAGTGATTACTTAGAAATAT
ACTTCCATAATTGTAGTGGCAAATTTTTCGGGTCACAGAGAGATATTGCT
CAGAATGTCCCTGGATAATTTATAAGGAAGAAAGGGAAAAAATTTTTCTC
CCCTTTTGGG

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGC
AGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGC
AAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAG
ATCAAAATTTCAGGTGACAGCAGATGCTGGTGTGAATGTGGAGAAAGAGG
AACACTCCTCCATTGTTGGTTGGATTGCAGGCTTGTACAACCACTCTGGA
AATCAGTCTGGTGGTTCAGAAAATTGGACATAGTACTACTGGAGGATCCA
GCAATACCTCTCCTGGGTATATATCCAGAAGATGCCCCAAGTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGTCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCACAAAGGATCTCACACAATATGTACTCACTGATAAGT
GGATATTAGGCCCAAAACTAAGATACCCAAGATAATAGATACAATCTCCT
AAACACTTGAAAATCCAGAAAAAAGAAGAATGAAGGGGTGGAACCTATGC
CCCTCCCCTAAAN

Query= MSMg01no462_b17.b1 MSMg01no462_b17.b1 CHROMAT_FILE:
MSMg01no462_b17.b1 PHD_FILE: MSMg01no462_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:59 2005
         (596 letters)



>mm_chr2_67124602_67125596
          Length = 995

 Score = 1023 bits (529), Expect = 0.0
 Identities = 560/573 (97%), Gaps = 6/573 (1%)
 Strand = Plus / Plus

                                                                       
Query: 24  gccttacctgagcatgtgcctctttcttcgttcttaaacccacccatgcaaacacttaca 83
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 224 gccttacctgagcatgtgcctctttcttcgctcttaaacccacccatgcaaccacttaca 283

                                                                       
Query: 84  agtttttttatagaattatgtgtttatgttttctagaggattacaaatatagacaccaat 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agtttttttatagaattatgtgtttatgttttctagaggattacaaatatagacaccaat 343

                                                                       
Query: 144 acatgattgcaaataatctattttttttattgagaacaattattttgagacacaaacatg 203
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 344 acatgattgcaaataatcta-tttttttattgagaacaattattttgagacacaaacatg 402

                                                                       
Query: 204 ttttatatagctttttaacaaggattattatttctatgtatttactcaggtatccattaa 263
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttttatatatctttttaacaaggattattatttctatgtatttactcaggtatccattaa 462

                                                                       
Query: 264 caaattaccaggtgaataaattgtggcatatttatgtaattgaatatggaaagacagtga 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caaattaccaggtgaataaattgtggcatatttatgtaattgaatatggaaagacagtga 522

                                                                       
Query: 324 aaacaataaattgttaatatgataaatatgaattgattaaggtaaataattatttttcta 383
           ||||||||||||||     ||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 523 aaacaataaattgt-----tgataaatatgaattgattaatgtatataattatttttcta 577

                                                                       
Query: 384 aaaaataaaaagttttaaaatggcataattattattatataaagtctagaagcaggaaag 443
           |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 578 aaaaataaaaagttttaaaaaggcataattattattatataaagtctagaagaaggaaag 637

                                                                       
Query: 444 aaaaagataaattgtcaaggaataacagtgaatctcatgaaagtaaaaaatactgtccaa 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aaaaagataaattgtcaaggaataacagtgaatctcatgaaagtaaaaaatactgtccaa 697

                                                                       
Query: 504 tatcataattggtggtttatcctagtttatatacttattaaaatttcaggaattttatac 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tatcataattggtggtttatcctagtttatatacttattaaaatttcaggaattttatac 757

                                            
Query: 564 tacttaaagtctatggatttagtgattacttag 596
           |||||||||||||||||||||||||||||||||
Sbjct: 758 tacttaaagtctatggatttagtgattacttag 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 995
Length adjustment: 10
Effective length of query: 586
Effective length of database: 985
Effective search space:   577210
Effective search space used:   577210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)