Query= MSMg01no462_l12.b1 MSMg01no462_l12.b1 CHROMAT_FILE:
MSMg01no462_l12.b1 PHD_FILE: MSMg01no462_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:49 2005
(241 letters)
>mm_chr2_179186839_179187477
Length = 639
Score = 424 bits (219), Expect = e-123
Identities = 235/241 (97%), Gaps = 2/241 (0%)
Strand = Plus / Minus
Query: 1 caagaaggcagaataataggcacattctcggaaaagatgaatgcctgtctgcactcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 439 caagaaggcagaataataggcacattctcggaaaagatgaatgcctgtctgtactcacct 380
Query: 61 tctgactagttctgccatttgccaaatcatacttccaaaggggggggggggaaagaaaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 379 tctgactagttctgccatttgccaaatcatacttccaaaggggggggggg--aagaaaga 322
Query: 121 gatcggggagggtcacccggcctcacctttaacctaaatacacttgcaaatttggtgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gatcggggagggtcacccggcctcacctttaacctaaatacacttgcaaatttggggaat 262
Query: 181 tcacgaaatttccacgttctgaaattaagaccttgaaggatcaggaaacaccacaggtgc 240
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacgaaatttccatgttccgaaattaagaccttgaaggatcaggaaacaccacaggtgc 202
Query: 241 c 241
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 639
Length adjustment: 9
Effective length of query: 232
Effective length of database: 630
Effective search space: 146160
Effective search space used: 146160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_l12.g1 MSMg01no462_l12.g1 CHROMAT_FILE:
MSMg01no462_l12.g1 PHD_FILE: MSMg01no462_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:49 2005
(254 letters)
>mm_chr2_178983700_178984353
Length = 654
Score = 484 bits (250), Expect = e-141
Identities = 253/254 (99%)
Strand = Plus / Plus
Query: 1 taaaacggaaagtaagaaaatcaagacaatgaaatcattttcctttctttcctgaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaaacggaaagtaagaaaatcaagacaatgaaatcattttcctttctttcctgaagatt 260
Query: 61 ccaaattctctggctcttgtctttttagtttagagcaaacatagcctgtcacctcggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ccaaattctctggctcttgtctttttagtttagagcaaacatagcctgtcacctcagtgg 320
Query: 121 caccttaagtcttcgctccctctcagaaccatcttgcatgtgaaaggttttatatccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccttaagtcttcgctccctctcagaaccatcttgcatgtgaaaggttttatatccccc 380
Query: 181 taacaattttcacagctgcatatatttataagaaataattggaaatgactgatgtgagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacaattttcacagctgcatatatttataagaaataattggaaatgactgatgtgagtc 440
Query: 241 acactccatgttca 254
||||||||||||||
Sbjct: 441 acactccatgttca 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
