XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAA
TGTTTTCTCTTTTTGTTGGGCCAGCTGCCCCACACAGTTCATGGCTGACA
TTCCACCTCCTTAGCTTGATACCCGTATTTTCTTTTTAGATTCATTTTGT
TCAGTGCTTTTGTTGCTGAACTGTTCTTGACCTCATTCAGCACTGTGCTG
TGCCAAGAGTGTGCTTTGCTTTACATACATCTTCTGTTGCGACTGTTCGT
TCTGCTTTCTCAAGACTTTGCGAACAGTCAACTTTCATTTGGAGCCACCA
GTGTGCTGCGCTTTCCTTTCACATAGCACGGCAATGGTGTCGAGGAAAAG
CTCCCTGCCGTCCAAATCAGCCACACCTTTCTATAAACACGCTCAGTGGT
GTCTGAGCAAGGATGAGAAACGCACTTGGCAAAGCAATCCACAACAGAGG
AGGAAGAGGAATGACAGTAAGACCCAAAGGGTCCTCTGCGTGTACTCCCC
CACTCTCTAATCTACTTTGGGCTTTTGAAAGGTCAGATCCAAGAAGGCCT
TGCGTGTGTGGGCCGCCATACTGTGCTCTTGTGTGGAGTACTCTGGGGCT
TAAGTATCACTCCCATGTTTGTTGAGACAAGATGTAAAGCACCCAGATGT
AAAGCACCTTTTGTAAGCACGATTCCTGGGCCATTTTTATCTTTCATCTT
TACCCCTTATGGCCCCCCCCCCTTTTGTAAATTGGAAATTGGTTCCCCGC
CTACCAAAAGAN

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
TTACACGAGGAATTCAAGGCCCATAACTAAACATGATAAAAGCAATCTAC
AGCAAATCAGTACCCAACATCAAAGTAAATGGAGAGAATCTGGAAGCAAT
CCCACTAAAATCAGGGACTAAACAAGGCTGCCCACTTTCTCCCTACCTTT
TCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAG
ATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGC
AGATGATATTTTTGTATATATACGTGACCCTAAAAACTCTACCAGAGAAC
TCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAAG
TCAAACAAGTCAATGGCCTTTCTCTATACAAAGAATAAACAGACTGAGAA
AGAAATTAGGGAAACAACACCCTTCTCAATAGTCCCAAATAATATGAAAT
ATCTTGGTGTGACTCTAACTAAGGAAGTAAAAGATCTGTATGATAAAAAC
TTCAAATCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGA
TCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCT
TTGCAAAAGCATCTACAGAATCAATGGAATCCCCATCAAAATCCAACAAA
ATTTTTCACGAATAAAAAGAGCAATTTGGCAATTCTCGGGAGAAAAAAAA
CCTTAG

Query= MSMg01no465_d10.b1 MSMg01no465_d10.b1 CHROMAT_FILE:
MSMg01no465_d10.b1 PHD_FILE: MSMg01no465_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:14 2005
         (545 letters)



>mm_chr2_83521080_83522025
          Length = 946

 Score =  978 bits (506), Expect = 0.0
 Identities = 533/542 (98%), Gaps = 1/542 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatgttttctctttttgttgggccagctgccccacacagttcatggctgacatt 64
           ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gaattcagtgttttgtctttttgttgggccagctgccccacacagttcatggctgacatt 687

                                                                       
Query: 65  ccacctcc-ttagcttgatacccgtattttctttttagattcattttgttcagtgctttt 123
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ccacctcctttagcttgatacccgtattttctttttagattcattttgttcagtgctttt 627

                                                                       
Query: 124 gttgctgaactgttcttgacctcattcagcactgtgctgtgccaagagtgtgctttgctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gttgctgaactgttcttgacctcattcagcactgtgctgtgccaagagtgtgctttgctt 567

                                                                       
Query: 184 tacatacatcttctgttgcgactgttcgttctgctttctcaagactttgcgaacagtcaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tacatacatcttctgttgcgactgttcgttctgctttctcaagactttgcgaacagtcaa 507

                                                                       
Query: 244 ctttcatttggagccaccagtgtgctgcgctttcctttcacatagcacggcaatggtgtc 303
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 506 ctttcatttggagccaccagtgtgctgcgctttcctttcacatagcaaggcaatggtgtc 447

                                                                       
Query: 304 gaggaaaagctccctgccgtccaaatcagccacacctttctataaacacgctcagtggtg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaggaaaagctccctgccgtccaaatcagccacacctttctataaacacgctcagtggtg 387

                                                                       
Query: 364 tctgagcaaggatgagaaacgcacttggcaaagcaatccacaacagaggaggaagaggaa 423
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 386 tctgagcaaggatgagaaacgcacttggcaaagcaatccacaagagaggaggaagaggaa 327

                                                                       
Query: 424 tgacagtaagacccaaagggtcctctgcgtgtactcccccactctctaatctactttggg 483
           ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct: 326 tgacagtaagacccaaagggtcctctgcgtgcacacccgcactctctaatctactttggg 267

                                                                       
Query: 484 cttttgaaaggtcagatccaagaaggccttgcgtgtgtgggccgccatactgtgctcttg 543
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 266 cttttgaaaggtcagatccaagaaggccttgcgtgtatgggccgccatactgtgctcttg 207

             
Query: 544 tg 545
           ||
Sbjct: 206 tg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space:   500760
Effective search space used:   500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)