Query= MSMg01no471_d02.b1 MSMg01no471_d02.b1 CHROMAT_FILE:
MSMg01no471_d02.b1 PHD_FILE: MSMg01no471_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:21 2005
(190 letters)
>mm_chr2_82078081_82078670
Length = 590
Score = 331 bits (171), Expect = 2e-95
Identities = 182/187 (97%), Gaps = 4/187 (2%)
Strand = Plus / Minus
Query: 6 gaattccacgatt--tc--tcttagttcttgaacaggcttgaccatgggggacaatctat 61
||||||||||| | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gaattccacgagtcatctttcttagttcttgaacaggcttgaccatgggggacaatctat 348
Query: 62 attttcaatatttagttcagatattgtcaggtagtgggtattttatgttttgtttatagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 attttcaatatttagttcagatattgtcaggtagtgggtattttatgttttgtttatagt 288
Query: 122 attccaacttcaagttcttagaagaaaaaaaattacaaaaatttccaccagcaatctgtg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 attccaacttcaagttcttagaagaaaaaaaattacaaaaatttccaccagcaatctgtg 228
Query: 182 ccttttt 188
|||||||
Sbjct: 227 ccttttt 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no471_d02.g1 MSMg01no471_d02.g1 CHROMAT_FILE:
MSMg01no471_d02.g1 PHD_FILE: MSMg01no471_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:21 2005
(516 letters)
>mm_chr2_81915789_81916704
Length = 916
Score = 893 bits (462), Expect = 0.0
Identities = 501/514 (97%), Gaps = 1/514 (0%)
Strand = Plus / Plus
Query: 4 atgttattggggg-aatctagatgagccctgagagtttagtcaataagctatcattccag 62
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgttattgggggaaatctagatgagccctgagagtttagtcaataagctatcattccag 262
Query: 63 ggcatttcttcctgcaaagggcacttaatcacaggtcagaattaatccctgagcaagtca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggcatttcttcctgcaaagggcacttaatcacaggtcagaattaatccctgagcaagtca 322
Query: 123 tatgcacccttgttaaacagtttgaacaagcaaagactgcctctctcataaaaaaccaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tatgcacccttgttaaacagtttgaacaagcaaagactgcctctctcataaaaaaccaca 382
Query: 183 cagcttaagtcacttgcagaaggcccctctgctctcctgacagtcactctgtgctaatcc 242
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 383 caccttaagtcacttgcagaaggcccctctgctctcctgacagtcaccctgtgctaatcc 442
Query: 243 agatccccgaactcctacccctgtatacctcagaactatgagccccagttttcaactcct 302
|||||||||| |||||||||||| ||||||||| |||||||||| |||||||||| ||||
Sbjct: 443 agatccccgacctcctacccctgcatacctcaggactatgagcctcagttttcaattcct 502
Query: 303 cttagttcccagcagtgtctgagtacataggggtatgagaactacaacctcagtcttcat 362
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 503 cttggttcccagcagtgtctgagtacataggggtatgagaactacaacctcagtcttcgt 562
Query: 363 ccaagccatttctcatctggagagacccggtattgagcccctgtcttaggctgcgttcct 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 563 cccagccatttctcatctggagagacccggtattgagcccctgtcttaggctgtgttcct 622
Query: 423 tctgccctgagccctacaaactgatggcggtgaagaaggaaagtagccgagggtctctgc 482
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 623 tctgccctgagccctacaaactgatggtggtgaagaaggaaagtagccgagggtctctgc 682
Query: 483 atttccaatccccaagagtagtgtcctgacaccc 516
||||||||||||||||||||||||||||||||||
Sbjct: 683 atttccaatccccaagagtagtgtcctgacaccc 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
