Query= MSMg01no471_m14.b1 MSMg01no471_m14.b1 CHROMAT_FILE:
MSMg01no471_m14.b1 PHD_FILE: MSMg01no471_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:10 2005
(600 letters)
>mm_chr2_134691879_134692879
Length = 1001
Score = 1077 bits (557), Expect = 0.0
Identities = 587/597 (98%), Gaps = 1/597 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtaatatccaacacttagatatctatgacatagcttggccatttgttcttaat 64
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtaataaccaacacttagatatctgtgacatagcttggccatttgttcttaat 264
Query: 65 gtacatatttaaaagcaaaagatctactaatgtaccattcaaaatatctttcaagttcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtacatatttaaaagcaaaagatctactaatgtaccattcaaaatatctttcaagttcta 324
Query: 125 cgcaagcctgccacatttttcagattaaggaatggaccacctttcgtcattgttcagcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgcaagcctgccacatttttcagattaaggaatggaccacctttcgtcattgttcagcct 384
Query: 185 tattaaaatagaccactcttgatttggattgggtttgttctgcctggtttggaactttac 244
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 385 tattaaaatagaccactcttgatttggattgggtttgtcctgcctggtttggaattttac 444
Query: 245 acacttgaaattataaatggtatattgttggg-tttttttgggaggtggggtggaatctc 303
|||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 445 acacttgaaattataaatggtatattattgggttttttttggggggtggggtggaatctc 504
Query: 304 tggcttctgctttatattctatctcttttcaaaatctaatttgttatagaaacatcaatt 363
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 505 tggcttctgctttatattctatctcttttcaaaatctaatttgctgtagaaacatcaatt 564
Query: 364 gtatacaaagaacaaaaacaatgaacagtctcttctatatccctgaaaaaccacctttat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtatacaaagaacaaaaacaatgaacagtctcttctatatccctgaaaaaccacctttat 624
Query: 424 ctgagcagtactttgttttatttgaacacttgctggattcctaatcccaaatctctgatg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgagcagtactttgttttatttgaacacttgctggattcctaatcccaaatctctgatg 684
Query: 484 actgtctctaagcatattggtgttacattcccaggaatgtcagtatgtgtctccttatga 543
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 685 actgtctctaagcatattggtgttacattcccaggaatgtcagtttgtgtctccttatga 744
Query: 544 acaggctccctctgtcccacttacaaacttaatgacaaatgctggctatcaatattg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acaggctccctctgtcccacttacaaacttaatgacaaatgctggctatcaatattg 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space: 584690
Effective search space used: 584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_m14.g1 MSMg01no471_m14.g1 CHROMAT_FILE:
MSMg01no471_m14.g1 PHD_FILE: MSMg01no471_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:10 2005
(662 letters)
>mm_chr2_134790267_134791328
Length = 1062
Score = 1006 bits (520), Expect = 0.0
Identities = 526/528 (99%)
Strand = Plus / Minus
Query: 1 catgacacagagttgtgtacaaagtgtttctcagacaatccttgtatcagatagatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 catgacacagagttgtgtacaaagtgtttctcagacaatccttgtatcagatagatacct 469
Query: 61 ttcctctaggaaggaggaaaatttctccagaaatactgctatttctctttgggattccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttcctctaggaaggaggaaaatttctccagaaatactgctatttctctttgggattccaa 409
Query: 121 aagcaaccactgagtgaaatctgattaaatgaactatttttgtcatccccaaactaccgg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 408 aagcaaccactgagtgaaatctgattaaatgaactatttttgtaatccccaaactaccgg 349
Query: 181 tggatttattccatagctcattacaaagtaaatcttacttctgtcttacagtagattaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tggatttattccatagctcattacaaagtaaatcttacttctgtcttacagtagattaag 289
Query: 241 tgttttggggacataattttgcaggttactactttgactaacgcagcaataaaatgtggg 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 288 tgttttggggacataattttgcaggttactactttgactaatgcagcaataaaatgtggg 229
Query: 301 gttaaaggagtatgtgtttaaatagttcaaattataattaataataattttaagaaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gttaaaggagtatgtgtttaaatagttcaaattataattaataataattttaagaaagat 169
Query: 361 acaatatctttatcaactgaaaagaagaaaacactaagaaatggtacaaatgaaattttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 acaatatctttatcaactgaaaagaagaaaacactaagaaatggtacaaatgaaattttt 109
Query: 421 ttgaagctggtgcctgattctggcacacttctcccgtacttaattctcctgacagaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ttgaagctggtgcctgattctggcacacttctcccgtacttaattctcctgacagaataa 49
Query: 481 gaacaaggtcaacgtaacattctcaaaatgtcagaatcatagttatta 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gaacaaggtcaacgtaacattctcaaaatgtcagaatcatagttatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
